RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 NUMBLQ9Y6R0 609 aa7.14□□□□□ -1.27
LINC00649-220ENST00000628906 C2orf16Q68DN1 1984 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 FNDC1Q4ZHG4 1894 aaPredicted RBP7.13□□□□□ -1.27
LINC00649-220ENST00000628906 ITPR2Q14571 2701 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 A0A087WV48 116 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 IGKV6D-41A0A0C4DH26 115 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 MAGEB6P1A0A0J9YX57 407 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 PTPDC1A2A3K4 754 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 CHURC1-FNTBB4DL54 471 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 NFIBO00712 420 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 ICAM1P05362 532 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 CD52P31358 61 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 FNTBP49356 437 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 PFKPQ01813 784 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 EXOSC9Q06265 439 aaKnown RBP7.13□□□□□ -1.27
LINC00649-220ENST00000628906 GIT2Q14161 759 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 BMS1Q14692 1282 aaKnown RBP7.13□□□□□ -1.27
LINC00649-220ENST00000628906 HSDL1Q3SXM5 330 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 COLEC12Q5KU26 742 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 CCDC158Q5M9N0 1113 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 TTC39AQ5SRH9 613 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 FAM102BQ5T8I3 360 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 MYSM1Q5VVJ2 828 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 SEPT14Q6ZU15 432 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 PPFIBP1Q86W92 1011 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 EDEM2Q9BV94 578 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 SETD4Q9NVD3 440 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 SPG21Q9NZD8 308 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 DKK4Q9UBT3 224 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 CCPG1Q9ULG6 757 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 LRFN2Q9ULH4 789 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 PCDHB7Q9Y5E2 793 aa7.13□□□□□ -1.27
LINC00649-220ENST00000628906 CLUHO75153 1309 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 FANCIQ9NVI1 1328 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 LOXHD1Q8IVV2 1947 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 PAPSS2O95340 614 aaPredicted RBP7.12□□□□□ -1.27
LINC00649-220ENST00000628906 PAPLNO95428 1278 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 CALML3P27482 149 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 HOXA6P31267 233 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 CXCL12P48061 93 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 SARSP49591 514 aaKnown RBP7.12□□□□□ -1.27
LINC00649-220ENST00000628906 SNAP25P60880 206 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 RPS6P62753 249 aaKnown RBP7.12□□□□□ -1.27
LINC00649-220ENST00000628906 CFHR1Q03591 330 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 RALBP1Q15311 655 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 SLFN13Q68D06 897 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 SLC30A10Q6XR72 485 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 ZNF852Q6ZMS4 543 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 RNF207Q6ZRF8 634 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 LRRC55Q6ZSA7 311 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 CEP68Q76N32 757 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 WWC1Q8IX03 1113 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 CHCHD4Q8N4Q1 142 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 CLEC4DQ8WXI8 215 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 SMOC1Q9H4F8 434 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 GPCPD1Q9NPB8 672 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 JADE2Q9NQC1 790 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 MRPS17Q9Y2R5 130 aaKnown RBP7.12□□□□□ -1.27
LINC00649-220ENST00000628906 STK24Q9Y6E0 443 aa7.12□□□□□ -1.27
LINC00649-220ENST00000628906 GREB1LQ9C091 1923 aaPredicted RBP7.11□□□□□ -1.27
LINC00649-220ENST00000628906 USP9YO00507 2555 aaPredicted RBP7.11□□□□□ -1.27
LINC00649-220ENST00000628906 CYP2D7A0A087X1C5 515 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 FAM205CA6NFA0 338 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 CDX4O14627 284 aaPredicted RBP7.11□□□□□ -1.27
LINC00649-220ENST00000628906 CAPN9O14815 690 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 RDXP35241 583 aaKnown RBP7.11□□□□□ -1.27
LINC00649-220ENST00000628906 TCEAL6Q6IPX3 200 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 TAF2Q6P1X5 1199 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 RAB44Q7Z6P3 723 aaPredicted RBP7.11□□□□□ -1.27
LINC00649-220ENST00000628906 SCUBE3Q8IX30 993 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 TMEM87AQ8NBN3 555 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 DEFB124Q8NES8 71 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 FGF14Q92915 247 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 TCEAL3Q969E4 200 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 GMCL1Q96IK5 515 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 ZNF558Q96NG5 402 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 ATP8A2Q9NTI2 1148 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 PRR12Q9ULL5 1215 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 PADI3Q9ULW8 664 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 ZFP37Q9Y6Q3 630 aaPredicted RBP7.11□□□□□ -1.27
LINC00649-220ENST00000628906 AHCTF1Q8WYP5 2266 aa7.11□□□□□ -1.27
LINC00649-220ENST00000628906 CCDC195A0A1B0GUA6 201 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.1□□□□□ -1.27
LINC00649-220ENST00000628906 K7ESF4 209 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 MAFO75444 373 aaPredicted RBP7.1□□□□□ -1.27
LINC00649-220ENST00000628906 UBTFL1P0CB47 393 aaPredicted RBP7.1□□□□□ -1.27
LINC00649-220ENST00000628906 CTSAP10619 480 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 RASA1P20936 1047 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 MPLP40238 635 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 CSRP3P50461 194 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 CLCN4P51793 760 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 SATB1Q01826 763 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 STXBP2Q15833 593 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 PARM1Q6UWI2 310 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 CCNI2Q6ZMN8 369 aaPredicted RBP7.1□□□□□ -1.27
LINC00649-220ENST00000628906 TPRG1Q6ZUI0 275 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 CACNA2D4Q7Z3S7 1137 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 RSPH3Q86UC2 560 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 SLC39A11Q8N1S5 342 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms