RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
SMN2-214ENST00000626847 CPLX1O14810 134 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 RASSF9O75901 435 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 CES1P23141 567 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 MLH1P40692 756 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 TBX4P57082 545 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 SULT2A1Q06520 285 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 BLMHQ13867 455 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 TNIP1Q15025 636 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 CCDC40Q4G0X9 1142 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 ARHGAP29Q52LW3 1261 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 HABP4Q5JVS0 413 aaKnown RBP9.11□□□□□ -0.95
SMN2-214ENST00000626847 SAMD5Q5TGI4 173 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 MCTP1Q6DN14 999 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 FIGNL1Q6PIW4 674 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 BZW1Q7L1Q6 419 aaKnown RBP9.11□□□□□ -0.95
SMN2-214ENST00000626847 HDXQ7Z353 690 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 NOP9Q86U38 636 aaKnown RBP9.11□□□□□ -0.95
SMN2-214ENST00000626847 METTL16Q86W50 562 aaKnown RBP9.11□□□□□ -0.95
SMN2-214ENST00000626847 ARHGAP18Q8N392 663 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 PAF1Q8N7H5 531 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 C1orf127Q8N9H9 656 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 MAIP1Q8WWC4 291 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 IFT81Q8WYA0 676 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 ZNF75CPQ92670 426 aaPredicted RBP9.11□□□□□ -0.95
SMN2-214ENST00000626847 DPF3Q92784 378 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 TBC1D31Q96DN5 1066 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 UQCC2Q9BRT2 126 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 FUT8Q9BYC5 575 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 ZCCHC2Q9C0B9 1178 aaKnown RBP9.11□□□□□ -0.95
SMN2-214ENST00000626847 VPS33BQ9H267 617 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 KCNF1Q9H3M0 494 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 SEMA4AQ9H3S1 761 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 DMAP1Q9NPF5 467 aaPredicted RBP9.11□□□□□ -0.95
SMN2-214ENST00000626847 CASS4Q9NQ75 786 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 AATFQ9NY61 560 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMN2-214ENST00000626847 MTUS1Q9ULD2 1270 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 KCNH4Q9UQ05 1017 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 SLC45A1Q9Y2W3 748 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 LTN1O94822 1766 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 THSD7BQ9C0I4 1608 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 LRRD1A4D1F6 860 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 CCDC151A5D8V7 595 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 C2orf81A6NN90 581 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 H0Y3Z8 333 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 EREGO14944 169 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 SPTLC2O15270 562 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 IDH3BO43837 385 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 EGFRP00533 1210 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 CYP2E1P05181 493 aaPredicted RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 CTSHP09668 335 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 GYS1P13807 737 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 TSPAN7P41732 249 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 MCM2P49736 904 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 GNAQP50148 359 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 MRPL28Q13084 256 aaKnown RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 DPYSQ14117 519 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 LBRQ14739 615 aaKnown RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 LONRF1Q17RB8 773 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 CCDC93Q567U6 631 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 NEPROQ6NW34 567 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 IRGCQ6NXR0 463 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 ZCCHC8Q6NZY4 707 aaKnown RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 KRT25Q7Z3Z0 450 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 LDHDQ86WU2 507 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 APPL2Q8NEU8 664 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 BRSK1Q8TDC3 778 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 IRGQQ8WZA9 623 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 HPS3Q969F9 1004 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 CFAP36Q96G28 342 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 LTV1Q96GA3 475 aaPredicted RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 C8orf48Q96LL4 319 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 C16orf45Q96MC5 204 aaPredicted RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 TRAPPC9Q96Q05 1148 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 OSBPL7Q9BZF2 842 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 DNAI2Q9GZS0 605 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 NSRP1Q9H0G5 558 aaKnown RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 EBF2Q9HAK2 575 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 C11orf16Q9NQ32 467 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 WDR35Q9P2L0 1181 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 FAM8A1Q9UBU6 413 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 TCEAL9Q9UHQ7 104 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 CCPG1Q9ULG6 757 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 SLC4A7Q9Y6M7 1214 aa9.1□□□□□ -0.95
SMN2-214ENST00000626847 MAP2P11137 1827 aaKnown RBP9.1□□□□□ -0.95
SMN2-214ENST00000626847 LTBP1Q14766 1721 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 TONSLQ96HA7 1378 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 FAM208AQ9UK61 1670 aaKnown RBP9.09□□□□□ -0.95
SMN2-214ENST00000626847 CASP8AP2Q9UKL3 1982 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 LOC102724428A0A0B4J2F2 783 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 IQANK1A0A1B0GTG1 560 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 HTR3EA5X5Y0 456 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 E9PMD0 336 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 STXBP3O00186 592 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 FOXN3O00409 490 aaPredicted RBP9.09□□□□□ -0.95
SMN2-214ENST00000626847 ATXN7O15265 892 aaPredicted RBP9.09□□□□□ -0.95
SMN2-214ENST00000626847 AKR1B10O60218 316 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 KPNA6O60684 536 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 SHOX2O60902 331 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms