RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 MAP3K20Q9NYL2 800 aaKnown RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 LMNAP02545 664 aaKnown RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 ESRRAP11474 423 aaPredicted RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 TTC39CQ8N584 583 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 UBE2Q2Q8WVN8 375 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 FAM96AQ9H5X1 160 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 FEM1BQ9UK73 627 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 PTPRKQ15262 1439 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 ENC1O14682 589 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 CCT5P48643 541 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 TTLL4Q14679 1199 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 ULK4Q96C45 1275 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 TSSK1BQ9BXA7 367 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 NGRNQ9NPE2 291 aaKnown RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 MCF2P10911 925 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 C2orf54Q08AI8 447 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 SCN4BQ8IWT1 228 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 RASGRP4Q8TDF6 673 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 STX18Q9P2W9 335 aaKnown RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 PZPP20742 1482 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 LIG3P49916 1009 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 RWDD2BP57060 319 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 KCNA1Q09470 495 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 NEK9Q8TD19 979 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 CHCHD3Q9NX63 227 aaKnown RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 PLEKHG1Q9ULL1 1385 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 KPNA7A9QM74 516 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 ANKRD13CQ8N6S4 541 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 MYO1DO94832 1006 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 PEX3P56589 373 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 COPS2P61201 443 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 CAV1Q03135 178 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 AP3B2Q13367 1082 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 PATL1Q86TB9 770 aaKnown RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 MAN1B1Q9UKM7 699 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 CAPN11Q9UMQ6 739 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 TET3O43151 1660 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 NFX1Q12986 1120 aaKnown RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 FLOT2Q14254 428 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 KYAT1Q16773 422 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 FOXP4Q8IVH2 680 aaPredicted RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 ING2Q9H160 280 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 GTPBP10A4D1E9 387 aaKnown RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 CFLARO15519 480 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 SPARCL1Q14515 664 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 LRRC41Q15345 812 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 ZNF568Q3ZCX4 644 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 PPP6R3Q5H9R7 873 aaPredicted RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 SLC27A3Q5K4L6 730 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 SH3TC2Q8TF17 1288 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 PRPF3O43395 683 aaKnown RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 DNAJC6O75061 913 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 RMDN3Q96TC7 470 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 SP110Q9HB58 689 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 KAT6AQ92794 2004 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 COBLO75128 1261 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 HOXA13P31271 388 aaPredicted RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 NR1H3Q13133 447 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 NAALADL2Q58DX5 795 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 WDR75Q8IWA0 830 aaKnown RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 TEKT4Q8WW24 435 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 SRPRBQ9Y5M8 271 aaKnown RBP11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 ARL4CP56559 192 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 PROM2Q8N271 834 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 C2orf40Q9H1Z8 148 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 SELENONQ9NZV5 590 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 SLC4A7Q9Y6M7 1214 aa11.93□□□□□ -0.5
CCDC144B-208ENST00000618081 CDC42BPAQ5VT25 1732 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 KRT87PA6NCN2 255 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 EIF2AK2P19525 551 aaKnown RBP11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 MORC4Q8TE76 937 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 MASTLQ96GX5 879 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 WDR91A4D1P6 747 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 KRT38O76015 456 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 MOCS3O95396 460 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 GNL1P36915 607 aaPredicted RBP11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 YAF2Q8IY57 180 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 RNF123Q5XPI4 1314 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 SLFN14P0C7P3 912 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 CDK8P49336 464 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 GPC3P51654 580 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 MAP3K10Q02779 954 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 GPBP1L1Q9HC44 474 aaPredicted RBP11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 INPP5FQ9Y2H2 1132 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 ATP8B1O43520 1251 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 COPB2P35606 906 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 ZBED6P86452 979 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 RMDN2Q96LZ7 410 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 PANX2Q96RD6 677 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 KCNH4Q9UQ05 1017 aa11.92□□□□□ -0.5
CCDC144B-208ENST00000618081 APOBEC2Q9Y235 224 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms