RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 POC1B-GALNT4F8VUJ3 575 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 BUB1BO60566 1050 aaPredicted RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 VAMP7P51809 220 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 OSTNP61366 133 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 MAP7D1Q3KQU3 841 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 GABPB2Q8TAK5 448 aaPredicted RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 ATP2A3Q93084 1043 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 SGK1O00141 431 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 TBX3O15119 743 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 OSBPP22059 807 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 SFNP31947 248 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 GYS2P54840 703 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 SLMAPQ14BN4 828 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 SURF1Q15526 300 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 SESTD1Q86VW0 696 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 ARHGEF2Q92974 986 aaKnown RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 RSRC1Q96IZ7 334 aaKnown RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 HOXC10Q9NYD6 342 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 CNOT8Q9UFF9 292 aaKnown RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 ANAPC5Q9UJX4 755 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 SPATA31A6Q5VVP1 1343 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 TLR3O15455 904 aaKnown RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 LDHAP00338 332 aaKnown RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 KRT1P04264 644 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 NR1D1P20393 614 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 NMT1P30419 496 aaKnown RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 PSMC5P62195 406 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 NEDD9Q14511 834 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 STXBP2Q15833 593 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 APOL6Q9BWW8 343 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 DNAJC5Q9H3Z4 198 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 ATP6V0A4Q9HBG4 840 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 KIAA1586Q9HCI6 787 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 ZCCHC17Q9NP64 241 aaKnown RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 MAD2L2Q9UI95 211 aa9.27□□□□□ -0.93
TMCO1-208ENST00000612311 NOVA2Q9UNW9 492 aaKnown RBP9.27□□□□□ -0.93
TMCO1-208ENST00000612311 RIMS1Q86UR5 1692 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 LRRD1A4D1F6 860 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 XPOTO43592 962 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 CTNND1O60716 968 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 CIB2O75838 187 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 FDX1P10109 184 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 GPC5P78333 572 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 GPR162Q16538 588 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 ADGRA1Q86SQ6 560 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 VPS52Q8N1B4 723 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 FAM149B1Q96BN6 582 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 NLRP4Q96MN2 994 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 MED10Q9BTT4 135 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 TUFT1Q9NNX1 390 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 FBXO40Q9UH90 709 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 PRR12Q9ULL5 1215 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 NPHP3-ACAD11A0A0J9YXS1 232 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 SSU72P8A0A1W2PR75 194 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 AP5Z1O43299 807 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 MARK3P27448 753 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 SLCO1A2P46721 670 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 NYAP1Q6ZVC0 841 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 HAUS6Q7Z4H7 955 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 RFX6Q8HWS3 928 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 GLYCTKQ8IVS8 523 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 DAGLBQ8NCG7 672 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 GABBR1Q9UBS5 961 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 ANAPC7Q9UJX3 599 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 MORC2Q9Y6X9 1032 aaPredicted RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 BAZ2BQ9UIF8 2168 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 IREB2P48200 963 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 EIF3BP55884 814 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 IFT88Q13099 833 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 GSPT2Q8IYD1 628 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 THNSL1Q8IYQ7 743 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 SPATA4Q8NEY3 305 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 FAM213AQ9BRX8 229 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 INTS2Q9H0H0 1204 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 ADAM22Q9P0K1 906 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 DIS3Q9Y2L1 958 aaKnown RBP9.26□□□□□ -0.93
TMCO1-208ENST00000612311 SNX24Q9Y343 169 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 SYNGAP1Q96PV0 1343 aa9.26□□□□□ -0.93
TMCO1-208ENST00000612311 RASGRF2O14827 1237 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 MED7O43513 233 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 RASSF2P50749 326 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 FXR2P51116 673 aaKnown RBP eCLIP9.25□□□□□ -0.933e-10■■■■■ 40.7
TMCO1-208ENST00000612311 YWHAGP61981 247 aaKnown RBP eCLIP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 RINT1Q6NUQ1 792 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 ARHGAP24Q8N264 748 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 SNX12Q9UMY4 172 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 ESYT3A0FGR9 886 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 HMGB1P1B2RPK0 211 aaPredicted RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 CLDN3O15551 220 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 HIP1RO75146 1068 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 VSNL1P62760 191 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 GEN1Q17RS7 908 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 EDRF1Q3B7T1 1238 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 KRT39Q6A163 491 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 ZNF746Q6NUN9 644 aaPredicted RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 SWSAP1Q6NVH7 229 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 PDZD4Q76G19 769 aaPredicted RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 RPUSD2Q8IZ73 545 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms