RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 RSRC1Q96IZ7 334 aaKnown RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 OSBPL9Q96SU4 736 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 EIF2AK1Q9BQI3 630 aaKnown RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 ZNF577Q9BSK1 485 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 PAGR1Q9BTK6 254 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 TEKT3Q9BXF9 490 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 IRX2Q9BZI1 471 aaPredicted RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 TMOD4Q9NZQ9 345 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 LMCD1Q9NZU5 365 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 ATP2A1O14983 1001 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 ZSCAN12O43309 604 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 N4BP1O75113 896 aaKnown RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 RASSF9O75901 435 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 HIRAP54198 1017 aaPredicted RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 TUBB2AQ13885 445 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 TKFCQ3LXA3 575 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 B3GNT9Q6UX72 402 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 MICALCLQ6ZW33 695 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 SPATA21Q7Z572 469 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 SPDYE1Q8NFV5 336 aaPredicted RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 CCDC102AQ96A19 550 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 CNOT6LQ96LI5 555 aaKnown RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 HSD17B14Q9BPX1 270 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 SLX1AQ9BQ83 275 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 TUBB2BQ9BVA1 445 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 VPS16Q9H269 839 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 SEMA6BQ9H3T3 888 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 PLEKHA4Q9H4M7 779 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 RAVER2Q9HCJ3 691 aaKnown RBP10.54□□□□□ -0.72
LINC01539-201ENST00000587904 KCND2Q9NZV8 630 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 ADAMTS5Q9UNA0 930 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 RLFQ13129 1914 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 WDR90Q96KV7 1748 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 LOC285556D6RIA3 1793 aa10.54□□□□□ -0.72
LINC01539-201ENST00000587904 IPO5O00410 1097 aaKnown RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 ZSCAN9O15535 394 aaPredicted RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 COBLO75128 1261 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 PRPF6O94906 941 aaKnown RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 FECHP22830 423 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 NAP1L1P55209 391 aaKnown RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 UBXN1Q04323 297 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 DRP2Q13474 957 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 CASP8Q14790 479 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 SLMAPQ14BN4 828 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 EPHA7Q15375 998 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 SNCBQ16143 134 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 SH3D19Q5HYK7 790 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 CPXCR1Q8N123 301 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 MB21D1Q8N884 522 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 RETREG2Q8NC44 543 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 ZNF507Q8TCN5 953 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 SYTL5Q8TDW5 730 aaPredicted RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 LMBR1Q8WVP7 490 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 EZH1Q92800 747 aaPredicted RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 SPDL1Q96EA4 605 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 TUBGCP2Q9BSJ2 902 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 DDX20Q9UHI6 824 aaKnown RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 UBIAD1Q9Y5Z9 338 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 ZHX2Q9Y6X8 837 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 MYO1FO00160 1098 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 EML1O00423 815 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 RNF40O75150 1001 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 GNA14O95837 355 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 GYPCP04921 128 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 GAP43P17677 238 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 DSG3P32926 999 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 MTIF2P46199 727 aaKnown RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 HMGCS2P54868 508 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 RBL2Q08999 1139 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 COG2Q14746 738 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 ZCWPW2Q504Y3 356 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 ARSHQ5FYA8 562 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 HERC4Q5GLZ8 1057 aaPredicted RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 REPS2Q8NFH8 660 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 DCPSQ96C86 337 aaKnown RBP10.53□□□□□ -0.72
LINC01539-201ENST00000587904 ATG4CQ96DT6 458 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 CEP63Q96MT8 703 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 NUP58Q9BVL2 599 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 EPC1Q9H2F5 836 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 RGL1Q9NZL6 768 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 COL20A1Q9P218 1284 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 PCDHA2Q9Y5H9 948 aa10.53□□□□□ -0.72
LINC01539-201ENST00000587904 PDLIM1O00151 329 aa10.52□□□□□ -0.73
LINC01539-201ENST00000587904 LIN7AO14910 233 aaPredicted RBP10.52□□□□□ -0.73
LINC01539-201ENST00000587904 MEFVO15553 781 aaPredicted RBP10.52□□□□□ -0.73
LINC01539-201ENST00000587904 TBCAO75347 108 aaKnown RBP10.52□□□□□ -0.73
LINC01539-201ENST00000587904 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.73
LINC01539-201ENST00000587904 ECEL1O95672 775 aa10.52□□□□□ -0.73
LINC01539-201ENST00000587904 ITGB5P18084 799 aa10.52□□□□□ -0.73
LINC01539-201ENST00000587904 YY1P25490 414 aa10.52□□□□□ -0.73
LINC01539-201ENST00000587904 CDR1P51861 262 aa10.52□□□□□ -0.73
LINC01539-201ENST00000587904 ADKP55263 362 aaKnown RBP10.52□□□□□ -0.73
LINC01539-201ENST00000587904 RPS6P62753 249 aaKnown RBP10.52□□□□□ -0.73
LINC01539-201ENST00000587904 PABPC4Q13310 644 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC01539-201ENST00000587904 SNX1Q13596 522 aa10.52□□□□□ -0.73
LINC01539-201ENST00000587904 GIT2Q14161 759 aa10.52□□□□□ -0.73
LINC01539-201ENST00000587904 CWF19L1Q69YN2 538 aaKnown RBP10.52□□□□□ -0.73
LINC01539-201ENST00000587904 RNF207Q6ZRF8 634 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms