RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 KCNMA1Q12791 1236 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 KCNH2Q12809 1159 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 IFI16Q16666 785 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 PTPN21Q16825 1174 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 ERCC6LQ2NKX8 1250 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 ZNF746Q6NUN9 644 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 GBP6Q6ZN66 633 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 MIGA2Q7L4E1 593 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 ZNF720Q7Z2F6 126 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 MIER3Q7Z3K6 550 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 CTAGE6Q86UF2 777 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 NLRX1Q86UT6 975 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 CTAGE4Q8IX94 777 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 GPC2Q8N158 579 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 SLC35F6Q8N357 371 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 SYTL5Q8TDW5 730 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 SECISBP2LQ93073 1101 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 HPS3Q969F9 1004 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 DYDC2Q96IM9 177 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 LXNQ9BS40 222 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 IFIH1Q9BYX4 1025 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 TANGO6Q9C0B7 1094 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 PDGFDQ9GZP0 370 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 UNC45AQ9H3U1 944 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 AGO4Q9HCK5 861 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 KCNH7Q9NS40 1196 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 ARHGAP20Q9P2F6 1191 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 HACL1Q9UJ83 578 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 RAB21Q9UL25 225 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 USP20Q9Y2K6 914 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 SAR1BQ9Y6B6 198 aa9.72□□□□□ -0.85
PPP4R1-213ENST00000579609 SBF1O95248 1867 aa9.71□□□□□ -0.85
PPP4R1-213ENST00000579609 LOC102724159A0A0B4J2E5 919 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 TARSL2A2RTX5 802 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 ARHGEF35A5YM69 484 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 LRRC53A6NM62 1247 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 VWA5AO00534 786 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 AKR1B10O60218 316 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 COBLO75128 1261 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 FLOT1O75955 427 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 CLSTN1O94985 981 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 GCNT3O95395 438 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 ITGB5P18084 799 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PTPRAP18433 802 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 CCND2P30279 289 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PSMC6P62333 389 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 MTMR1Q13613 665 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PGM5Q15124 567 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PWP2Q15269 919 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 LRRC41Q15345 812 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 SLC18A3Q16572 532 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 EXOC3L4Q17RC7 722 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 HGSNATQ68CP4 663 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 TMCO3Q6UWJ1 677 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 RRAGAQ7L523 313 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 VPS36Q86VN1 386 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 TPH2Q8IWU9 490 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 FAM178BQ8IXR5 827 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 REPS2Q8NFH8 660 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 CYP2W1Q8TAV3 490 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 SLC35C1Q96A29 364 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 BORCS6Q96GS4 357 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PKNOX2Q96KN3 472 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 INPP4AQ96PE3 977 aaPredicted RBP9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 FIZ1Q96SL8 496 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PDCD2LQ9BRP1 358 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 RUSC1Q9BVN2 902 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 GANQ9H2C0 597 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PXMP2Q9NR77 195 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 FAM207AQ9NSI2 230 aaPredicted RBP9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 HOXC10Q9NYD6 342 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 TBC1D7Q9P0N9 293 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 FBXO40Q9UH90 709 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 EXOC7Q9UPT5 735 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PPME1Q9Y570 386 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PCDHA13Q9Y5I0 950 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 PTPRFP10586 1907 aa9.71□□□□□ -0.86
PPP4R1-213ENST00000579609 A0A0A6YYK5 440 aaPredicted RBP9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 TRIM66O15016 1216 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 KIAA0391O15091 583 aaKnown RBP9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 TGFB1I1O43294 461 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 NOL4O94818 638 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 ZRANB2O95218 330 aaKnown RBP eCLIP9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 ARP10275 920 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 FERP16591 822 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 HOXD13P35453 343 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 COPB2P35606 906 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 MAGEA1P43355 309 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 SNAP25P60880 206 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 PSMC5P62195 406 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 GTF2BQ00403 316 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 CYP4A11Q02928 519 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 COG2Q14746 738 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 WDR93Q6P2C0 686 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 FBXO38Q6PIJ6 1188 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 RNF207Q6ZRF8 634 aa9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 INTS8Q75QN2 995 aaKnown RBP9.7□□□□□ -0.86
PPP4R1-213ENST00000579609 USP37Q86T82 979 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms