RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 RAB34Q9BZG1 259 aa15.31■□□□□ 0.04
SPG7-215ENST00000566682 SUGCTQ9HAC7 445 aa15.31■□□□□ 0.04
SPG7-215ENST00000566682 TUFT1Q9NNX1 390 aa15.31■□□□□ 0.04
SPG7-215ENST00000566682 CXXC1Q9P0U4 656 aaPredicted RBP15.31■□□□□ 0.04
SPG7-215ENST00000566682 A0A087WWV3 80 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 IGKV6-21A0A0C4DH24 114 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 M0QZ92 97 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 MAFO75444 373 aaPredicted RBP15.3■□□□□ 0.04
SPG7-215ENST00000566682 VTNP04004 478 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 RPA1P27694 616 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 TMOD1P28289 359 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 BECN1Q14457 450 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 TCTN1Q2MV58 587 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 PLEKHG4Q58EX7 1191 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 XKR9Q5GH70 373 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 ARL6IP4Q66PJ3 421 aaKnown RBP15.3■□□□□ 0.04
SPG7-215ENST00000566682 CNKSR3Q6P9H4 555 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 DBF4BQ8NFT6 615 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 PIGOQ8TEQ8 1089 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 CELF4Q9BZC1 486 aaKnown RBP15.3■□□□□ 0.04
SPG7-215ENST00000566682 MTIF3Q9H2K0 278 aaKnown RBP15.3■□□□□ 0.04
SPG7-215ENST00000566682 TRPV2Q9Y5S1 764 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 CLIC4Q9Y696 253 aa15.3■□□□□ 0.04
SPG7-215ENST00000566682 RANBP2P49792 3224 aaKnown RBP15.3■□□□□ 0.04
SPG7-215ENST00000566682 KDM3AQ9Y4C1 1321 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 VWA3AA6NCI4 1184 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 ZBBXA8MT70 800 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 SOX1O00570 391 aaPredicted RBP15.29■□□□□ 0.04
SPG7-215ENST00000566682 MAP3K13O43283 966 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 BMP15O95972 392 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
SPG7-215ENST00000566682 GHRP10912 638 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 XRCC6P12956 609 aaKnown RBP eCLIP15.29■□□□□ 0.04
SPG7-215ENST00000566682 CDC25AP30304 524 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 CCT6AP40227 531 aaKnown RBP15.29■□□□□ 0.04
SPG7-215ENST00000566682 DRP2Q13474 957 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 LPIN1Q14693 890 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 FBXO47Q5MNV8 452 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 FOXD4L5Q5VV16 416 aaPredicted RBP15.29■□□□□ 0.04
SPG7-215ENST00000566682 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 FOXD4L4Q8WXT5 416 aaPredicted RBP15.29■□□□□ 0.04
SPG7-215ENST00000566682 MAP7D2Q96T17 732 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 PPP1R16BQ96T49 567 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 CDHR5Q9HBB8 845 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 ANKEF1Q9NU02 776 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 AKT3Q9Y243 479 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 GINS2Q9Y248 185 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 PPME1Q9Y570 386 aa15.29■□□□□ 0.04
SPG7-215ENST00000566682 MICAL3Q7RTP6 2002 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
SPG7-215ENST00000566682 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
SPG7-215ENST00000566682 PP2D1A8MPX8 630 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 GPR32O75388 356 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 BAIAP3O94812 1187 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 MUTP22033 750 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 DNM2P50570 870 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 POLGP54098 1239 aaPredicted RBP15.28■□□□□ 0.04
SPG7-215ENST00000566682 NLRP11P59045 1033 aaKnown RBP15.28■□□□□ 0.04
SPG7-215ENST00000566682 CEBPZQ03701 1054 aaKnown RBP15.28■□□□□ 0.04
SPG7-215ENST00000566682 PKP1Q13835 747 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 IKBKEQ14164 716 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 PTPAQ15257 358 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 ECM1Q16610 540 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 KIZQ2M2Z5 673 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 EXOC8Q8IYI6 725 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 SNX29Q8TEQ0 813 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 NACC1Q96RE7 527 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 JPH2Q9BR39 696 aaPredicted RBP15.28■□□□□ 0.04
SPG7-215ENST00000566682 IFIH1Q9BYX4 1025 aaKnown RBP15.28■□□□□ 0.04
SPG7-215ENST00000566682 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
SPG7-215ENST00000566682 STK24Q9Y6E0 443 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 SQORQ9Y6N5 450 aa15.28■□□□□ 0.04
SPG7-215ENST00000566682 PTPRSQ13332 1948 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 GBF1Q92538 1859 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 ABHD14A-ACY1A0A1B0GW23 586 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 F13A1P00488 732 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 RFC5P40937 340 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 RARRES1P49788 294 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.04
SPG7-215ENST00000566682 KRT79Q5XKE5 535 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 TSHZ1Q6ZSZ6 1077 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 USP38Q8NB14 1042 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 SLC7A3Q8WY07 619 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 SEPT8Q92599 483 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 APBB2Q92870 758 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 LRCH3Q96II8 777 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 USP28Q96RU2 1077 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 MMTAG2Q9BU76 263 aaKnown RBP15.27■□□□□ 0.04
SPG7-215ENST00000566682 AGO3Q9H9G7 860 aaKnown RBP15.27■□□□□ 0.04
SPG7-215ENST00000566682 BMP2KQ9NSY1 1161 aaPredicted RBP15.27■□□□□ 0.04
SPG7-215ENST00000566682 KIAA1024Q9UPX6 916 aa15.27■□□□□ 0.04
SPG7-215ENST00000566682 GRXCR1A8MXD5 290 aa15.26■□□□□ 0.03
SPG7-215ENST00000566682 CD52P31358 61 aa15.26■□□□□ 0.03
SPG7-215ENST00000566682 GPC3P51654 580 aa15.26■□□□□ 0.03
SPG7-215ENST00000566682 CRYBB1P53674 252 aaPredicted RBP15.26■□□□□ 0.03
SPG7-215ENST00000566682 WDR5P61964 334 aaKnown RBP15.26■□□□□ 0.03
SPG7-215ENST00000566682 GRIN1Q05586 938 aa15.26■□□□□ 0.03
SPG7-215ENST00000566682 FAM109BQ6ICB4 259 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms