RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 ITGA4P13612 1032 aa12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 VCX3BQ9H321 246 aa12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 AGRPO00253 132 aa12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 PTPN21Q16825 1174 aa12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 XPO4Q9C0E2 1151 aaKnown RBP12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 ADARB2Q9NS39 739 aaKnown RBP12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 PRG3Q9Y2Y8 225 aaPredicted RBP12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 HEY1Q9Y5J3 304 aa12.96□□□□□ -0.34
TUBGCP4-208ENST00000564079 HECW2Q9P2P5 1572 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 EBAG9O00559 213 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 AKR1B1P15121 316 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 RAG1P15918 1043 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 RMDN1Q96DB5 314 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 VCXQ9H320 206 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 JPH1Q9HDC5 661 aaPredicted RBP12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 RGL2O15211 777 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 SYF2O95926 243 aaKnown RBP12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 ATP6V1E1P36543 226 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 SGO2Q562F6 1265 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 TMEM270Q6UE05 265 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 SAAL1Q96ER3 474 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 TYW1Q9NV66 732 aaKnown RBP12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 IKBKBO14920 756 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 CYP21A2P08686 494 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 DNAJB2P25686 324 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 CTNNA1P35221 906 aaKnown RBP12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 GTF2H3Q13889 308 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 PCGF5Q86SE9 256 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 C19orf81C9J6K1 198 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 SNX2O60749 519 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 KRT222Q8N1A0 295 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 P2RX5Q93086 422 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 FAM81BQ96LP2 452 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 DDX50Q9BQ39 737 aaKnown RBP12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 MUC3BQ9H195 1237 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 PCDHA7Q9UN72 937 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 PDZD8Q8NEN9 1154 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 TMEM39AQ9NV64 488 aa12.95□□□□□ -0.34
TUBGCP4-208ENST00000564079 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 KCNV1Q6PIU1 500 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 TEX13BQ9BXU2 312 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 DONSONQ9NYP3 566 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 IPO5O00410 1097 aaKnown RBP12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 ZMYND10O75800 440 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 QARSP47897 775 aaKnown RBP12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 MAGOHBQ96A72 148 aaKnown RBP12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 STARD7Q9NQZ5 370 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 CHD1O14646 1710 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 POTEB3A0JP26 581 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 SPTLC1O15269 473 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 KCNA1Q09470 495 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 CYP4F22Q6NT55 531 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 POTEBQ6S5H4 581 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 SDCCAG3Q96C92 435 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 LRGUKQ96M69 825 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 TUBB4AP04350 444 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 ZNF75DP51815 510 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 MTMR3Q13615 1198 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 DGKDQ16760 1214 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 ADCK5Q3MIX3 580 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 ARRDC4Q8NCT1 418 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 IQCDQ96DY2 449 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 PASKQ96RG2 1323 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 UBA6A0AVT1 1052 aaPredicted RBP12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 PRPF3O43395 683 aaKnown RBP12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 EVI5O60447 810 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 OCM2P0CE71 109 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 OCMP0CE72 109 aaPredicted RBP12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 IRX4P78413 519 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 TEKT4Q8WW24 435 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 TMEM169Q96HH4 297 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 MAGEF1Q9HAY2 307 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 UBE4BO95155 1302 aa12.94□□□□□ -0.34
TUBGCP4-208ENST00000564079 TMEM247A6NEH6 219 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 EEF1GP26641 437 aaKnown RBP12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 SFNP31947 248 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 TUBB4BP68371 445 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 COG7P83436 770 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 SLMAPQ14BN4 828 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 TRIM58Q8NG06 486 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 TMEM143Q96AN5 459 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 LXNQ9BS40 222 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 NR2E3Q9Y5X4 410 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 MMP1P03956 469 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 CYP2C9P11712 490 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 PAMP19021 973 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 GCLMP48507 274 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 ARMC6Q6NXE6 501 aa12.93□□□□□ -0.34
TUBGCP4-208ENST00000564079 TOGARAM2Q6ZUX3 1019 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms