RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 WDR46O15213 610 aaKnown RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 MAPK13O15264 365 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 C21orf2O43822 256 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 N4BP1O75113 896 aaKnown RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 FLOT1O75955 427 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 NOL4O94818 638 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 SLITRK3O94933 977 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 LYPLA2O95372 231 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 ATP1A1P05023 1023 aaKnown RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 FERP16591 822 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 SCP2P22307 547 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 STAT3P40763 770 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 POLR2FP61218 127 aaKnown RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 TGFB2P61812 414 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 CYP27A1Q02318 531 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 KLHL30Q0D2K2 578 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 RASA3Q14644 834 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 CFAP221Q4G0U5 840 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 KLHDC7AQ5VTJ3 777 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 HGSNATQ68CP4 663 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 SFR1Q86XK3 245 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 NELFCDQ8IXH7 590 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 EIF1ADQ8N9N8 165 aaKnown RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 RDM1Q8NG50 284 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 PXYLP1Q8TE99 480 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 ZBED3Q96IU2 234 aaPredicted RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 ARID3AQ99856 593 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 MXRA8Q9BRK3 442 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 ZNF577Q9BSK1 485 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 GANQ9H2C0 597 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 BHMT2Q9H2M3 363 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 ZHX3Q9H4I2 956 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 TMEM206Q9H813 350 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 TBC1D22BQ9NU19 505 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 DBR1Q9UK59 544 aaKnown RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 ZHX1Q9UKY1 873 aaPredicted RBP9.11□□□□□ -0.95
SPG11-209ENST00000558253 FRMD4BQ9Y2L6 1034 aa9.11□□□□□ -0.95
SPG11-209ENST00000558253 FRMPD4Q14CM0 1322 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 A0A0A6YYK5 440 aaPredicted RBP9.1□□□□□ -0.95
SPG11-209ENST00000558253 A0A0U1RQJ8 604 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 MACROD2A1Z1Q3 448 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 RCCD1A6NED2 376 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 ZNF263O14978 683 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 P4HA2O15460 535 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 DKC1O60832 514 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPG11-209ENST00000558253 ZMYND10O75800 440 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 GCNT3O95395 438 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 CFBP00751 764 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 UCHL3P15374 230 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 TNFRSF8P28908 595 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 AARSP49588 968 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPG11-209ENST00000558253 NPEPPSP55786 919 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 ENPEPQ07075 957 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 CETN1Q12798 172 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 MAP2K5Q13163 448 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 NNTQ13423 1086 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 TDRD12Q587J7 1177 aaKnown RBP9.1□□□□□ -0.95
SPG11-209ENST00000558253 CCDC181Q5TID7 509 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 B3GNT9Q6UX72 402 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 ZNF771Q7L3S4 317 aaPredicted RBP9.1□□□□□ -0.95
SPG11-209ENST00000558253 ZNF720Q7Z2F6 126 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
SPG11-209ENST00000558253 LDHDQ86WU2 507 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 CREG2Q8IUH2 290 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 C12orf56Q8IXR9 622 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 SYCE1Q8N0S2 351 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 MYCT1Q8N699 235 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 FAM71BQ8TC56 605 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 ATRIPQ8WXE1 791 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 EXOC4Q96A65 974 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 EEF2KMTQ96G04 330 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 LRCH3Q96II8 777 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 SPAG5Q96R06 1193 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 KIAA1683Q9H0B3 1180 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 ST6GALNAC4Q9H4F1 302 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 ZSWIM4Q9H7M6 989 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 DMAC2Q9NW81 257 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.1□□□□□ -0.95
SPG11-209ENST00000558253 TBC1D7Q9P0N9 293 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 TRIM10Q9UDY6 481 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 DIS3Q9Y2L1 958 aaKnown RBP9.1□□□□□ -0.95
SPG11-209ENST00000558253 PCDHGC5Q9Y5F6 944 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 PCDHAC2Q9Y5I4 1007 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 CNTNAP1P78357 1384 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 SLX4Q8IY92 1834 aa9.1□□□□□ -0.95
SPG11-209ENST00000558253 RPTORQ8N122 1335 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 NPHP3-ACAD11A0A0J9YXS1 232 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 ARHGEF35A5YM69 484 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 A6NNZ2 444 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 IPO5O00410 1097 aaKnown RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 IRF6O14896 467 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 EPHB6O15197 1021 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 PMM2O15305 246 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 MAFGO15525 162 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 CTNND1O60716 968 aaKnown RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 ABL1P00519 1130 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 P4HBP07237 508 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms