RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 EPG5Q9HCE0 2579 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 PEAK1Q9H792 1746 aa6.15□□□□□ -1.42
MTHFD1-216ENST00000557539 FAM47E-STBD1D6RA91 191 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 TGM5O43548 720 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 PCDHGA12O60330 932 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 VAV1P15498 845 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 PAMP19021 973 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 LPOP22079 712 aaPredicted RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 GRK2P25098 689 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 GRK3P35626 688 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 KIR3DL1P43629 444 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 GTF2H3Q13889 308 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 CLUL1Q15846 466 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 CRY1Q16526 586 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 ARHGAP44Q17R89 818 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 INF2Q27J81 1249 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 COBLL1Q53SF7 1204 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 EEF1DP3Q658K8 133 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 RCSD1Q6JBY9 416 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 SEZ6L2Q6UXD5 910 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 Q7L0L9 218 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 C16orf59Q7L2K0 433 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 C11orf96Q7Z7L8 435 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 CMIPQ8IY22 773 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 CMTR2Q8IYT2 770 aaKnown RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 SHISA5Q8N114 240 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 TCP11L2Q8N4U5 519 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 ZNF655Q8N720 491 aaPredicted RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 DAGLBQ8NCG7 672 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 ENOX1Q8TC92 643 aaKnown RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 EZH1Q92800 747 aaPredicted RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 TCTN2Q96GX1 697 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 DDX20Q9UHI6 824 aaKnown RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 SAP30BPQ9UHR5 308 aaKnown RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 TAGLN3Q9UI15 199 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 CBLCQ9ULV8 474 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 PCDHGA9Q9Y5G4 932 aaKnown RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 PCDHGA8Q9Y5G5 932 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 PCDHGA7Q9Y5G6 932 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 PCDHGA6Q9Y5G7 932 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 PCDHGA3Q9Y5H0 932 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 PCDHGA2Q9Y5H1 932 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 OAS3Q9Y6K5 1087 aaKnown RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 FRMPD2Q68DX3 1309 aaPredicted RBP6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 LRRC37A3O60309 1634 aa6.14□□□□□ -1.43
MTHFD1-216ENST00000557539 NPHP3-ACAD11A0A0J9YXS1 232 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 CCDC189A1A4V9 331 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 GOLGA8AA7E2F4 631 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 GOLGA8BA8MQT2 603 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 PRR33A8MZF0 331 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 H7C1D1 291 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 WNT9AO14904 365 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 SH3BP5O60239 455 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 PPFIA4O75335 1185 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 H2AFYO75367 372 aaKnown RBP6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 FOSP01100 380 aaPredicted RBP6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 MAP4P27816 1152 aaKnown RBP6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 BMP8BP34820 402 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 MAP2K2P36507 400 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 LRRC32Q14392 662 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 GBX1Q14549 363 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 ACAP2Q15057 778 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 MCTP1Q6DN14 999 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 CTU1Q7Z7A3 348 aaKnown RBP6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 DTX1Q86Y01 620 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 AMOTL1Q8IY63 956 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 PANK1Q8TE04 598 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 E2F7Q96AV8 911 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 SCYL1Q96KG9 808 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 KCNJ15Q99712 375 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 C1GALT1Q9NS00 363 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 INVSQ9Y283 1065 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 DAAM1Q9Y4D1 1078 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 TNS3Q68CZ2 1445 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 SPATA31E1Q6ZUB1 1445 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 SSH2Q76I76 1423 aa6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 XRN1Q8IZH2 1706 aaKnown RBP6.13□□□□□ -1.43
MTHFD1-216ENST00000557539 FAM95CA0A1B0GW59 222 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 CCDC144AA2RUR9 1427 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 KLHL33A6NCF5 533 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 APAF1O14727 1248 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 ERC2O15083 957 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 MYO1BO43795 1136 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 BRD4O60885 1362 aaPredicted RBP6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 ASGR2P07307 311 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 SYPP08247 313 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 FAM87AP0C7U9 286 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 KRT15P19012 456 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 VCAM1P19320 739 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 SLC9A1P19634 815 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 HOXA10P31260 410 aaPredicted RBP6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 ATP7BP35670 1465 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 KRT85P78386 507 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 TNK2Q07912 1038 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 MORC3Q14149 939 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 RALBP1Q15311 655 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 TERF2Q15554 542 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 NFKBIBQ15653 356 aa6.12□□□□□ -1.43
MTHFD1-216ENST00000557539 ARHGAP31Q2M1Z3 1444 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms