RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 CLK2P49760 499 aaKnown RBP6.74□□□□□ -1.33
ATXN3-245ENST00000556958 LPIN1Q14693 890 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 SBK1Q52WX2 424 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 TAF2Q6P1X5 1199 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 DCLRE1AQ6PJP8 1040 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 SLC30A10Q6XR72 485 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 KCTD1Q719H9 257 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 SLC44A3Q8N4M1 653 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 PJA1Q8NG27 643 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 USP26Q9BXU7 913 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.74□□□□□ -1.33
ATXN3-245ENST00000556958 ARHGEF3Q9NR81 526 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 SEMA4GQ9NTN9 838 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 CDH22Q9UJ99 828 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 PCDHB7Q9Y5E2 793 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 SCN10AQ9Y5Y9 1956 aa6.74□□□□□ -1.33
ATXN3-245ENST00000556958 GCN1Q92616 2671 aaKnown RBP6.74□□□□□ -1.33
ATXN3-245ENST00000556958 NAV2Q8IVL1 2488 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 PNMA6EA0A0J9YXQ4 647 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 NCAM2O15394 837 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 NARSO43776 548 aaKnown RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 VSIG8P0DPA2 414 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 NDUFV2P19404 249 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 PPM1AP35813 382 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 RBM25P49756 843 aaKnown RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 LIMK1P53667 647 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 STARD6P59095 220 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 SMC1AQ14683 1233 aaKnown RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 PPP2R5DQ14738 602 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 PTPN14Q15678 1187 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 SOWAHCQ53LP3 525 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 GIMAP6Q6P9H5 292 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 TSHZ1Q6ZSZ6 1077 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 CABP7Q86V35 215 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 STK11IPQ8N1F8 1099 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 C12orf76Q8N812 135 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 COLGALT1Q8NBJ5 622 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 NEDD1Q8NHV4 660 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 CLEC4DQ8WXI8 215 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 STAMQ92783 540 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 NELL1Q92832 810 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 GLG1Q92896 1179 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 EAF2Q96CJ1 260 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 C16orf70Q9BSU1 422 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 MYL10Q9BUA6 226 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 OSBPL6Q9BZF3 934 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 RANBP17Q9H2T7 1088 aaKnown RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 MLXIPQ9HAP2 919 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 TYW1Q9NV66 732 aaKnown RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 SETD4Q9NVD3 440 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 TLR7Q9NYK1 1049 aaKnown RBP6.73□□□□□ -1.33
ATXN3-245ENST00000556958 SQORQ9Y6N5 450 aa6.73□□□□□ -1.33
ATXN3-245ENST00000556958 KANSL1LA0AUZ9 987 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 C2orf71A6NGG8 1288 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 TBKBP1A7MCY6 615 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 MINDY4BA8MYZ0 360 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 RBAK-RBAKDNI3L0D1 243 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 GOLIM4O00461 696 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 CLASP2O75122 1294 aaKnown RBP6.72□□□□□ -1.33
ATXN3-245ENST00000556958 TGFB3P10600 412 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 GLULP15104 373 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 USP46P62068 366 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 ARHGAP4P98171 946 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 GIT2Q14161 759 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 HSDL1Q3SXM5 330 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 FBXO47Q5MNV8 452 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 CELF3Q5SZQ8 465 aaKnown RBP6.72□□□□□ -1.33
ATXN3-245ENST00000556958 IER5Q5VY09 327 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 TMC5Q6UXY8 1006 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 GPR149Q86SP6 731 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 RTN4RL1Q86UN2 441 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-245ENST00000556958 PPFIBP1Q86W92 1011 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 GPR152Q8TDT2 470 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 CHMP4CQ96CF2 233 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 KLHL5Q96PQ7 755 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 NELL2Q99435 816 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 RXFP3Q9NSD7 469 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 NOB1Q9ULX3 412 aaKnown RBP6.72□□□□□ -1.33
ATXN3-245ENST00000556958 SLC27A5Q9Y2P5 690 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 ASPMQ8IZT6 3477 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 ZBED9Q6R2W3 1325 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 NRCAMQ92823 1304 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 ZZEF1O43149 2961 aa6.72□□□□□ -1.33
ATXN3-245ENST00000556958 FAM170BA6NMN3 283 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 NOP56O00567 594 aaKnown RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 KCNK5O95279 499 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 CXCL14O95715 111 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 GGPS1O95749 300 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 SLC3A2P08195 630 aaKnown RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 CD52P31358 61 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 GBP2P32456 591 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 CA8P35219 290 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 ADD2P35612 726 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 SARSP49591 514 aaKnown RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 TFAP4Q01664 338 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 FUT2Q10981 343 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 UBE3CQ15386 1083 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 CCDC96Q2M329 555 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms