RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 CD52P31358 61 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 UBE3AQ05086 875 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 CYFIP1Q7L576 1253 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 FRMD5Q7Z6J6 570 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 KREMEN2Q8NCW0 462 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 ESR2Q92731 530 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 EVI5LQ96CN4 794 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 CDCA3Q99618 268 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-218ENST00000555628 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 CDH22Q9UJ99 828 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 ZNF215Q9UL58 517 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-218ENST00000555628 CDY2AQ9Y6F7 541 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 SQORQ9Y6N5 450 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 NOP56O00567 594 aaKnown RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 FIBPO43427 364 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 CYTH3O43739 400 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 STAM2O75886 525 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 PARP1P09874 1014 aaKnown RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 ID4P47928 161 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 ERVFC1P60507 584 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 MRPS6P82932 125 aaKnown RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 NMIQ13287 307 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 NEDD9Q14511 834 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 LAPTM4AQ15012 233 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 SEC23AQ15436 765 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 PAN2Q504Q3 1202 aaKnown RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 CWF19L1Q69YN2 538 aaKnown RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 ANKRD54Q6NXT1 300 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 DNAJB3Q8WWF6 145 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 ZBTB10Q96DT7 871 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 ZSCAN10Q96SZ4 725 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 RNF41Q9H4P4 317 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-218ENST00000555628 TLE6Q9H808 572 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 KAT14Q9H8E8 782 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 TUBE1Q9UJT0 475 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 PCDHA1Q9Y5I3 950 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 IGSF9BQ9UPX0 1349 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 SPTBN2O15020 2390 aa10.52□□□□□ -0.73
PRKCH-218ENST00000555628 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 GSTTP1A0A1W2PQM5 241 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 MED19A0JLT2 244 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-218ENST00000555628 FSD2A1L4K1 749 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 MGEA5O60502 916 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 SCG2P13521 617 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 KCNA2P16389 499 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 CLK2P49760 499 aaKnown RBP10.51□□□□□ -0.73
PRKCH-218ENST00000555628 PPFIA1Q13136 1202 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 GRIK4Q16099 956 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 UBALD2Q8IYN6 164 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 NKD2Q969F2 451 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-218ENST00000555628 NEK1Q96PY6 1258 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 FTHL17Q9BXU8 183 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 RIOX1Q9H6W3 641 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 VAT1LQ9HCJ6 419 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 ZSWIM5Q9P217 1185 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 PADI3Q9ULW8 664 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 SORCS3Q9UPU3 1222 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 FANCMQ8IYD8 2048 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 KDM3AQ9Y4C1 1321 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 CHD8Q9HCK8 2581 aa10.51□□□□□ -0.73
PRKCH-218ENST00000555628 B4E1Z4 1266 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 C2CD4DB7Z1M9 353 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 GCOM1H8Y6P7 765 aaPredicted RBP10.5□□□□□ -0.73
PRKCH-218ENST00000555628 FGF18O76093 207 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 POLR2MP0CAP2 368 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 TCF7P36402 384 aaPredicted RBP10.5□□□□□ -0.73
PRKCH-218ENST00000555628 PDE1AP54750 535 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 PRR20EP86478 221 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 PRR20CP86479 221 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 PRR20DP86480 221 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 PRR20BP86481 221 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 PRR20AP86496 221 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 MTMR3Q13615 1198 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 TUSC1Q2TAM9 212 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 GNPTABQ3T906 1256 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 CCDC178Q5BJE1 867 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 UTP14CQ5TAP6 766 aaKnown RBP10.5□□□□□ -0.73
PRKCH-218ENST00000555628 IQCA1Q86XH1 822 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 ADSSL1Q8N142 457 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 PCYT2Q99447 389 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 POMKQ9H5K3 350 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 CWH43Q9H720 699 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 EVA1BQ9NVM1 165 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 LZTS1Q9Y250 596 aa10.5□□□□□ -0.73
PRKCH-218ENST00000555628 HIDE1A8MVS5 230 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 ATP9AO75110 1047 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 NPR3P17342 541 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 SARSP49591 514 aaKnown RBP10.49□□□□□ -0.73
PRKCH-218ENST00000555628 CLCN5P51795 746 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 SKOR1P84550 965 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 PCNX4Q63HM2 1172 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 MCTP2Q6DN12 878 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 DESI1Q6ICB0 168 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 PDE12Q6L8Q7 609 aaKnown RBP10.49□□□□□ -0.73
PRKCH-218ENST00000555628 LYPD8Q6UX82 237 aa10.49□□□□□ -0.73
PRKCH-218ENST00000555628 FCHSD1Q86WN1 690 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms