RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 ADAMTS1Q9UHI8 967 aa15.24■□□□□ 0.03
MSH2-206ENST00000543555 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
MSH2-206ENST00000543555 NAB2Q15742 525 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 NFRKBQ6P4R8 1299 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 STXBP4Q6ZWJ1 553 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 MCF2L2Q86YR7 1114 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 FAM186BQ8IYM0 893 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 IL31RAQ8NI17 732 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 KCNH7Q9NS40 1196 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 FBXL5Q9UKA1 691 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 GTPBP10A4D1E9 387 aaKnown RBP15.23■□□□□ 0.03
MSH2-206ENST00000543555 ARHGEF35A5YM69 484 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 DDX39AO00148 427 aaKnown RBP15.23■□□□□ 0.03
MSH2-206ENST00000543555 POLR3GO15318 223 aaPredicted RBP15.23■□□□□ 0.03
MSH2-206ENST00000543555 HIRAP54198 1017 aaPredicted RBP15.23■□□□□ 0.03
MSH2-206ENST00000543555 ITIH3Q06033 890 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 C2orf54Q08AI8 447 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 ODR4Q5SWX8 454 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 NIPA1Q7RTP0 329 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 MKNK1Q9BUB5 465 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 TLR10Q9BXR5 811 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 SIX2Q9NPC8 291 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 GCNT4Q9P109 453 aa15.23■□□□□ 0.03
MSH2-206ENST00000543555 NAP1L1P55209 391 aaKnown RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 ZNF280AP59817 542 aaPredicted RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 PTK2Q05397 1052 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 TNFAIP1Q13829 316 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 ZNF771Q7L3S4 317 aaPredicted RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 KSR1Q8IVT5 923 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 PKD2L1Q9P0L9 805 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 BZW2Q9Y6E2 419 aaKnown RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 NCK2O43639 380 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 ALAS1P13196 640 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 COG2Q14746 738 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 CASP8Q14790 479 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 ANGEL2Q5VTE6 544 aaKnown RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 HS2ST1Q7LGA3 356 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 MIER3Q7Z3K6 550 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 CPXCR1Q8N123 301 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 RBM46Q8TBY0 533 aaKnown RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 SLC38A10Q9HBR0 1119 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 HACL1Q9UJ83 578 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 PRDM4Q9UKN5 801 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 DHX15O43143 795 aaKnown RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 PPP1R12BO60237 982 aaPredicted RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 KLRC1P26715 233 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 MAPK7Q13164 816 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 DGKZQ13574 1117 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 ZNF571Q7Z3V5 609 aaPredicted RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 MMGT1Q8N4V1 131 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 PSMB7Q99436 277 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 RAVER2Q9HCJ3 691 aaKnown RBP15.22■□□□□ 0.03
MSH2-206ENST00000543555 UBIAD1Q9Y5Z9 338 aa15.22■□□□□ 0.03
MSH2-206ENST00000543555 HIP1RO75146 1068 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 CXCR5P32302 372 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 PRKCIP41743 596 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 TKFCQ3LXA3 575 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 PCNX4Q63HM2 1172 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 DAW1Q8N136 415 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 PACSIN1Q9BY11 444 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 AGO4Q9HCK5 861 aaKnown RBP15.21■□□□□ 0.03
MSH2-206ENST00000543555 AGPAT3Q9NRZ7 376 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 GINM1Q9NU53 330 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 DMAC2Q9NW81 257 aa15.21■□□□□ 0.03
MSH2-206ENST00000543555 AJAP1Q9UKB5 411 aaPredicted RBP15.21■□□□□ 0.03
MSH2-206ENST00000543555 H3BQF6 201 aa15.21■□□□□ 0.02
MSH2-206ENST00000543555 EIF3JO75822 258 aaKnown RBP15.21■□□□□ 0.02
MSH2-206ENST00000543555 P4HBP07237 508 aaKnown RBP15.21■□□□□ 0.02
MSH2-206ENST00000543555 JAM2P57087 298 aa15.21■□□□□ 0.02
MSH2-206ENST00000543555 ITGB3BPQ13352 177 aaPredicted RBP15.21■□□□□ 0.02
MSH2-206ENST00000543555 MUM1L1Q5H9M0 696 aa15.21■□□□□ 0.02
MSH2-206ENST00000543555 C10orf76Q5T2E6 689 aa15.21■□□□□ 0.02
MSH2-206ENST00000543555 SPATA4Q8NEY3 305 aa15.21■□□□□ 0.02
MSH2-206ENST00000543555 SYTL5Q8TDW5 730 aaPredicted RBP15.21■□□□□ 0.02
MSH2-206ENST00000543555 PDE11AQ9HCR9 933 aa15.21■□□□□ 0.02
MSH2-206ENST00000543555 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.02
MSH2-206ENST00000543555 GPRC5DQ9NZD1 345 aa15.21■□□□□ 0.02
MSH2-206ENST00000543555 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
MSH2-206ENST00000543555 PALMO75781 387 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 MRPS9P82933 396 aaKnown RBP15.2■□□□□ 0.02
MSH2-206ENST00000543555 GPS2Q13227 327 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 MAP9Q49MG5 647 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 PADI6Q6TGC4 694 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 STRA6Q9BX79 667 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 HOMER2Q9NSB8 354 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 PCDHGC5Q9Y5F6 944 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 PPP1R37O75864 691 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 EAPPQ56P03 285 aaPredicted RBP15.2■□□□□ 0.02
MSH2-206ENST00000543555 CCDC181Q5TID7 509 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 CCDC70Q6NSX1 233 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 GPC2Q8N158 579 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 GOLGA5Q8TBA6 731 aa15.2■□□□□ 0.02
MSH2-206ENST00000543555 MAP3K20Q9NYL2 800 aaKnown RBP15.2■□□□□ 0.02
MSH2-206ENST00000543555 BTNL10A8MVZ5 291 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 FLOT1O75955 427 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 CYP2J2P51589 502 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 GGA3Q9NZ52 723 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 PPP1R9AQ9ULJ8 1098 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms