RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	STOML1	Q9UBI4	398 aa		6	□□□□□ -1.45
ECHDC1-223	ENST00000534442	NDOR1	Q9UHB4	597 aa		6	□□□□□ -1.45
ECHDC1-223	ENST00000534442	NBEA	Q8NFP9	2946 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	SMG1	Q96Q15	3661 aa	Known RBP	5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PROB1	E7EW31	1015 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ARNTL	O00327	626 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	AURKA	O14965	403 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	F13B	P05160	661 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	GSN	P06396	782 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	NPR1	P16066	1061 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CAPN2	P17655	700 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ITIH2	P19823	946 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	SCRN1	Q12765	414 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	KIF22	Q14807	665 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	AOC3	Q16853	763 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	OTUD7B	Q6GQQ9	843 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	INTS5	Q6P9B9	1019 aa	Known RBP	5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	MFSD4A	Q8N468	514 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CNBD1	Q8NA66	436 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	DAGLB	Q8NCG7	672 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	DDX1	Q92499	740 aa	Known RBP	5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TP53INP1	Q96A56	240 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PRRX2	Q99811	253 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	GPR62	Q9BZJ7	368 aa		5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	DDX56	Q9NY93	547 aa	Known RBP	5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	SOS1	Q07889	1333 aa	Predicted RBP	5.99	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TONSL	Q96HA7	1378 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PRAMEF22	A3QJZ6	481 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	WASH4P	A8MWX3	477 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	STXBP3	O00186	592 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CP	P00450	1065 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CD3E	P07766	207 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CNGA1	P29973	690 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CDKN1C	P49918	316 aa	Predicted RBP	5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	OXCT1	P55809	520 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ST5	P78524	1137 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	LACTB	P83111	547 aa	Predicted RBP	5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	POU4F1	Q01851	419 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	NKPD1	Q17RQ9	610 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CYP27C1	Q4G0S4	372 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TBC1D9B	Q66K14	1250 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	RNF43	Q68DV7	783 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CNNM4	Q6P4Q7	775 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PRR23C	Q6ZRP0	262 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PRR23B	Q6ZRT6	265 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ADSSL1	Q8N142	457 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	FBXL6	Q8N531	539 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	NPLOC4	Q8TAT6	608 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	FRS2	Q8WU20	508 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	IP6K1	Q92551	441 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	COPS5	Q92905	334 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PTPRN2	Q92932	1015 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TCTN2	Q96GX1	697 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	FCRL3	Q96P31	734 aa	Predicted RBP	5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	C11orf49	Q9H6J7	331 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	MAPRE3	Q9UPY8	281 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ATP8A1	Q9Y2Q0	1164 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TRAF6	Q9Y4K3	522 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TNPO3	Q9Y5L0	923 aa	Known RBP	5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ST14	Q9Y5Y6	855 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	DDX60L	Q5H9U9	1706 aa	Known RBP	5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ITPR3	Q14573	2671 aa		5.98	□□□□□ -1.45
ECHDC1-223	ENST00000534442	DCX	O43602	365 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	EFCAB14	O75071	495 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	THBD	P07204	575 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	IFNGR1	P15260	489 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	SOX5	P35711	763 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	GATA4	P43694	442 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ZNF460	Q14592	562 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TNIP1	Q15025	636 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	CLEC16A	Q2KHT3	1053 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PLEKHG6	Q3KR16	790 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PRAMEF18	Q5VWM3	479 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	KCNT2	Q6UVM3	1135 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	USP53	Q70EK8	1073 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	ZNF655	Q8N720	491 aa	Predicted RBP	5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PRPF38A	Q8NAV1	312 aa	Known RBP	5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	PTPN18	Q99952	460 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	SLC12A9	Q9BXP2	914 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	GPRC5C	Q9NQ84	441 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	SRRD	Q9UH36	339 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	HECTD1	Q9ULT8	2610 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	LAMB1	P07942	1786 aa		5.97	□□□□□ -1.45
ECHDC1-223	ENST00000534442	FRYL	O94915	3013 aa		5.96	□□□□□ -1.45
ECHDC1-223	ENST00000534442	TAF1	P21675	1872 aa		5.96	□□□□□ -1.45
ECHDC1-223	ENST00000534442	FBN3	Q75N90	2809 aa		5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	MYO9B	Q13459	2157 aa		5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	TCRBV16S1A1N1	A0A5B0	115 aa		5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	C2orf71	A6NGG8	1288 aa		5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	GNAT3	A8MTJ3	354 aa		5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	RASGRP1	O95267	797 aa		5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	VAV1	P15498	845 aa		5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	POU3F2	P20265	443 aa	Predicted RBP	5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	CYP27A1	Q02318	531 aa		5.96	□□□□□ -1.46
ECHDC1-223	ENST00000534442	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.96	□□□□□ -1.46

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