RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ASB15Q8WXK1 588 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 RPGRQ92834 1020 aaKnown RBP4.54□□□□□ -1.68
CSMD3-210ENST00000534172 C16orf92Q96LL3 132 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 RPS6KC1Q96S38 1066 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 ELF4Q99607 663 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-210ENST00000534172 MENTQ9BUN1 341 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 CCDC8Q9H0W5 538 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-210ENST00000534172 INCENPQ9NQS7 918 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 ARHGAP20Q9P2F6 1191 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 NOC2LQ9Y3T9 749 aaKnown RBP4.54□□□□□ -1.68
CSMD3-210ENST00000534172 SPEF1Q9Y4P9 236 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 PTPRMP28827 1452 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 UBA6A0AVT1 1052 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-210ENST00000534172 BCAR1P56945 870 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 HTRA3P83110 453 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 SMAD3P84022 425 aaKnown RBP4.54□□□□□ -1.68
CSMD3-210ENST00000534172 PFKPQ01813 784 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 NFATC3Q12968 1075 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 SMAD2Q15796 467 aaKnown RBP4.54□□□□□ -1.68
CSMD3-210ENST00000534172 ESPNLQ6ZVH7 1005 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 C14orf80Q86SX3 495 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 PROSER1Q86XN7 944 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 RBM12BQ8IXT5 1001 aaKnown RBP4.54□□□□□ -1.68
CSMD3-210ENST00000534172 TMEFF1Q8IYR6 380 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 MYO1HQ8N1T3 1032 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 TOX2Q96NM4 488 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 TRIM8Q9BZR9 551 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 BCAS3Q9H6U6 928 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 EMC7Q9NPA0 242 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 NEMP1O14524 444 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 KCNK3O14649 394 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 EIF3JO75822 258 aaKnown RBP4.53□□□□□ -1.68
CSMD3-210ENST00000534172 ATF3P18847 181 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 ECE1P42892 770 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 ITGA1P56199 1179 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 MAP3K12Q12852 859 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 UBE4AQ14139 1066 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 TERF2Q15554 542 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 DDB1Q16531 1140 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 CATSPEREQ5SY80 951 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 IQSEC1Q6DN90 963 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 C7orf31Q8N865 590 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 ACAP3Q96P50 834 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 GORASP1Q9BQQ3 440 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 SGPP1Q9BX95 441 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 SPTLC3Q9NUV7 552 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 SYNPO2Q9UMS6 1093 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 PRDM2Q13029 1718 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 DVL2O14641 736 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 CUTAO60888 179 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 CAND2O75155 1236 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 MMEP08473 750 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 SLC9A1P19634 815 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 NCKAP1LP55160 1127 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 ALDH6A1Q02252 535 aaKnown RBP4.53□□□□□ -1.68
CSMD3-210ENST00000534172 KCNA10Q16322 511 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 CIAPIN1Q6FI81 312 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 SAPCD2Q86UD0 394 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 FAM129CQ86XR2 697 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 CHPFQ8IZ52 775 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 ZDHHC5Q9C0B5 715 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 BTBD7Q9P203 1132 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 TARBP1Q13395 1621 aaKnown RBP4.53□□□□□ -1.68
CSMD3-210ENST00000534172 SHROOM2Q13796 1616 aa4.53□□□□□ -1.68
CSMD3-210ENST00000534172 PRAMEF22A3QJZ6 481 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 SH3D21A4FU49 640 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 K7ESF4 209 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 C1QTNF9P0C862 333 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 RPL13P26373 211 aaKnown RBP4.52□□□□□ -1.69
CSMD3-210ENST00000534172 APEX1P27695 318 aaKnown RBP4.52□□□□□ -1.69
CSMD3-210ENST00000534172 THBS2P35442 1172 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 TMPRSS15P98073 1019 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 PIN1Q13526 163 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-210ENST00000534172 STILQ15468 1287 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 PRAMEF18Q5VWM3 479 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 TMC5Q6UXY8 1006 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 FAM26EQ8N5C1 309 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 ZSCAN18Q8TBC5 510 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-210ENST00000534172 HOOK2Q96ED9 719 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 TUBGCP5Q96RT8 1024 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 PCGF6Q9BYE7 350 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 CDH19Q9H159 772 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 NTMQ9P121 344 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-210ENST00000534172 TGM5O43548 720 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 KRT18P05783 430 aaKnown RBP4.52□□□□□ -1.69
CSMD3-210ENST00000534172 SEC23AQ15436 765 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 LIPIQ6XZB0 460 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 COG1Q8WTW3 980 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 ZBTB8AQ96BR9 441 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 PWWP2AQ96N64 755 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 RTFDC1Q9BY42 306 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-210ENST00000534172 AASDHPPTQ9NRN7 309 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 PTPRTO14522 1441 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 WASHC2AQ641Q2 1341 aa4.52□□□□□ -1.69
CSMD3-210ENST00000534172 ST20-MTHFSA0A0A6YYL1 179 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 H0Y858 1186 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 PLIN1O60240 522 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 PI3P19957 117 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 MC3RP41968 323 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms