RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 MYADMQ96S97 322 aa2.1□□□□□ -2.07
KNL1-211ENST00000533001 SLF1Q9BQI6 1058 aa2.1□□□□□ -2.07
KNL1-211ENST00000533001 SLC28A3Q9HAS3 691 aa2.1□□□□□ -2.07
KNL1-211ENST00000533001 PXMP2Q9NR77 195 aa2.1□□□□□ -2.07
KNL1-211ENST00000533001 STARD9Q9P2P6 4700 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 C1RP00736 705 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 ITGB2P05107 769 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 SELPP16109 830 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 RBM5P52756 815 aaKnown RBP eCLIP2.09□□□□□ -2.07
KNL1-211ENST00000533001 EPHA5P54756 1037 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 TNFAIP2Q03169 654 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 RAB3GAP1Q15042 981 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 UGCGQ16739 394 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 LURAP1LQ8IV03 231 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 MB21D2Q8IYB1 491 aaPredicted RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 PNNQ9H307 717 aaKnown RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 SLC2A4RGQ9NR83 387 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 DNAJB4Q9UDY4 337 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 SQORQ9Y6N5 450 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 CCDC88CQ9P219 2028 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 LGALS2P05162 132 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 UBTFL1P0CB47 393 aaPredicted RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 ZNF286BP0CG31 522 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 RFC2P35250 354 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 NUBP1P53384 320 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 PPP2R2DQ66LE6 453 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 PHLDB3Q6NSJ2 640 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 KCTD1Q719H9 257 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 SLC44A3Q8N4M1 653 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 NUP133Q8WUM0 1156 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 TRAPPC12Q8WVT3 735 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 TGS1Q96RS0 853 aaKnown RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 PKMYT1Q99640 499 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 STK31Q9BXU1 1019 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 SEZ6LQ9BYH1 1024 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 PAG1Q9NWQ8 432 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 YLPM1P49750 1951 aaKnown RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 DNAH7Q8WXX0 4024 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 GOLIM4O00461 696 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 GFRA3O60609 400 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 CLCN4P51793 760 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 CLCN5P51795 746 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 WNT7BP56706 349 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 FOXK2Q01167 660 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 EXOSC10Q01780 885 aaKnown RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 CCINQ13939 588 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 RNF180Q86T96 592 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 SKAP1Q86WV1 359 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 CCDC60Q8IWA6 550 aaPredicted RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 ZDHHC14Q8IZN3 488 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 DAW1Q8N136 415 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 SPEM1Q8N4L4 309 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 SRBD1Q8N5C6 995 aaKnown RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 PLA2G2FQ9BZM2 168 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 POLR3BQ9NW08 1133 aaPredicted RBP2.09□□□□□ -2.07
KNL1-211ENST00000533001 MCM9Q9NXL9 1143 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 CACNG4Q9UBN1 327 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 SWAP70Q9UH65 585 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 MROH7Q68CQ1 1323 aa2.09□□□□□ -2.07
KNL1-211ENST00000533001 BIRC6Q9NR09 4857 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 RB1P06400 928 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 UQCRFS1P1P0C7P4 283 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 RAP1GAPP47736 663 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 IRX3P78415 501 aaPredicted RBP2.09□□□□□ -2.08
KNL1-211ENST00000533001 ATP2B2Q01814 1243 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 RAB30Q15771 203 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 FRMD5Q7Z6J6 570 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 DGKHQ86XP1 1220 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 ZGPATQ8N5A5 531 aaKnown RBP2.09□□□□□ -2.08
KNL1-211ENST00000533001 MMP19Q99542 508 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 KCNK12Q9HB15 430 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 DUSP12Q9UNI6 340 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 NOC2LQ9Y3T9 749 aaKnown RBP2.09□□□□□ -2.08
KNL1-211ENST00000533001 GPSM3Q9Y4H4 160 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 INSL6Q9Y581 213 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 MAFBQ9Y5Q3 323 aaPredicted RBP2.09□□□□□ -2.08
KNL1-211ENST00000533001 SLC4A7Q9Y6M7 1214 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 NR3C2P08235 984 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 PTH1RQ03431 593 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 NECTIN1Q15223 517 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 RASEFQ8IZ41 740 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 ETNPPLQ8TBG4 499 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 SNRNP27Q8WVK2 155 aaKnown RBP2.09□□□□□ -2.08
KNL1-211ENST00000533001 HAPLN2Q9GZV7 340 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 ACAD9Q9H845 621 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 IL21Q9HBE4 155 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 RGS18Q9NS28 235 aa2.09□□□□□ -2.08
KNL1-211ENST00000533001 UBR4Q5T4S7 5183 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 HERC2O95714 4834 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 TMEM150BA6NC51 233 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 SRRM3A6NNA2 597 aaPredicted RBP2.08□□□□□ -2.08
KNL1-211ENST00000533001 H3BRB1 525 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 PER2O15055 1255 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 HRO43593 1189 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CABYRO75952 493 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 CHRNB1P11230 501 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 BMP3P12645 472 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 EPCAMP16422 314 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 KIAA0753Q2KHM9 967 aa2.08□□□□□ -2.08
KNL1-211ENST00000533001 PLEKHM2Q8IWE5 1019 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms