RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 BBOF1Q8ND07 529 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 CCDC68Q9H2F9 335 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 EFCC1Q9HA90 598 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 IPO11Q9UI26 975 aaKnown RBP12.19□□□□□ -0.46
PTPRK-221ENST00000532331 LRRN2O75325 713 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 CASP14P31944 242 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 EPHA7Q15375 998 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 ARL13BQ3SXY8 428 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 NBPF12Q5TAG4 269 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-221ENST00000532331 POTEDQ86YR6 584 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 TSC1Q92574 1164 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 GCNT4Q9P109 453 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 BCORL1Q5H9F3 1711 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 RASA1P20936 1047 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 ARHGAP24Q8N264 748 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 MCUR1Q96AQ8 359 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 SUCLA2Q9P2R7 463 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-221ENST00000532331 NFKBIAP25963 317 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 CDC25BP30305 580 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 H7C0C1 242 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 MAGEB2O15479 319 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 COBLO75128 1261 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 ATP5OP48047 213 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 EFNA5P52803 228 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 BACE1P56817 501 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 RFX6Q8HWS3 928 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 CABS1Q96KC9 395 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 MROH8Q9H579 483 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 BNIP3LO60238 219 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 RPS6KA5O75582 802 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 PTPROQ16827 1216 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 MUM1L1Q5H9M0 696 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 DNAJC24Q6P3W2 148 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 POTEAQ6S8J7 498 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 RNF149Q8NC42 400 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 EPSTI1Q96J88 318 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 KIAA1210Q9ULL0 1709 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 PPP4CP60510 307 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 LAMC2Q13753 1193 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 ZNF699Q32M78 642 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 RUNDC3BQ96NL0 473 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 RRAGDQ9NQL2 400 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-221ENST00000532331 ANAPC5Q9UJX4 755 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 MAN1B1Q9UKM7 699 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 ESYT2A0FGR8 921 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 E9PMD0 336 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 STX2P32856 288 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 VPS41P49754 854 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 XKR3Q5GH77 459 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
PTPRK-221ENST00000532331 FAM213AQ9BRX8 229 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 TACC3Q9Y6A5 838 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 POTECB2RU33 542 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 SRGAP2BP0DMP2 458 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 ATF2P15336 505 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 GBP1P32455 592 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 SFR1Q86XK3 245 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-221ENST00000532331 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 SKA2Q8WVK7 121 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-221ENST00000532331 ZNF148Q9UQR1 794 aa12.18□□□□□ -0.46
PTPRK-221ENST00000532331 RNF40O75150 1001 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 HEXIM1O94992 359 aaKnown RBP12.17□□□□□ -0.46
PTPRK-221ENST00000532331 RECQLP46063 649 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-221ENST00000532331 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 KAZNQ674X7 775 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 RAD54LQ92698 747 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 ZNF653Q96CK0 615 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 RWDD2AQ9UIY3 292 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 DEPDC5O75140 1603 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 OAS2P29728 719 aaKnown RBP12.17□□□□□ -0.46
PTPRK-221ENST00000532331 DPCR1Q3MIW9 517 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 XXYLT1Q8NBI6 393 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 DPH5Q9H2P9 285 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 ADM5C9JUS6 153 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 CCNE1P24864 410 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 CC2D1AQ6P1N0 951 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-221ENST00000532331 CACNA2D3Q8IZS8 1091 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 ANKRD42Q8N9B4 389 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 DPF2Q92785 391 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 GDAP1L1Q96MZ0 367 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 EFCAB8A8MWE9 144 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 PDHXO00330 501 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 TDP2O95551 362 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 YWHABP31946 246 aaKnown RBP12.17□□□□□ -0.46
PTPRK-221ENST00000532331 DDR1Q08345 913 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 MESDQ14696 234 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 SGMS1Q86VZ5 419 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 PAGE5Q96GU1 130 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 ZNF560Q96MR9 790 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 MRPL47Q9HD33 250 aaKnown RBP12.17□□□□□ -0.46
PTPRK-221ENST00000532331 HOMER3Q9NSC5 361 aa12.17□□□□□ -0.46
PTPRK-221ENST00000532331 TADA2AO75478 443 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 CDC27P30260 824 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 LMNB2Q03252 620 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 EHHADHQ08426 723 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms