RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 C14orf80Q86SX3 495 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 TREML1Q86YW5 311 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 IL17REQ8NFR9 667 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 INPP5DQ92835 1189 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 SLC7A6OSQ96CW6 309 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 NMD3Q96D46 503 aaKnown RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 NOX5Q96PH1 765 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 HNRNPABQ99729 332 aaKnown RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 METTL5Q9NRN9 209 aaKnown RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 KRT82Q9NSB4 513 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 IL1RAPL1Q9NZN1 696 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 ANGEL1Q9UNK9 670 aaKnown RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 SRPRBQ9Y5M8 271 aaKnown RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 MYPNQ86TC9 1320 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 PASKQ96RG2 1323 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 TMEM110-MUSTN1A8MSY1 372 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 TRIM21P19474 475 aaKnown RBP8.4□□□□□ -1.06
PTPRK-219ENST00000531050 GRIA2P42262 883 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 RCN1Q15293 331 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 CCDC6Q16204 474 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 TYW1BQ6NUM6 668 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 DYDC2Q96IM9 177 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 TCHPQ9BT92 498 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 MYLK2Q9H1R3 596 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 PTTG2Q9NZH5 202 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 BTBD7Q9P203 1132 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 SEC63Q9UGP8 760 aaKnown RBP8.4□□□□□ -1.06
PTPRK-219ENST00000531050 HAO1Q9UJM8 370 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 ITM2BQ9Y287 266 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 MYH10P35580 1976 aa8.4□□□□□ -1.06
PTPRK-219ENST00000531050 PHRF1Q9P1Y6 1649 aaKnown RBP8.4□□□□□ -1.06
PTPRK-219ENST00000531050 C4AP0C0L4 1744 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 C4BP0C0L5 1744 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 ATP5HO75947 161 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 KRT36O76013 467 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 FTCDO95954 541 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 NUDT17P0C025 328 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 ITGA6P23229 1130 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 TARSP26639 723 aaKnown RBP8.4□□□□□ -1.07
PTPRK-219ENST00000531050 EIF4A3P38919 411 aaKnown RBP8.4□□□□□ -1.07
PTPRK-219ENST00000531050 NEK2P51955 445 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 SLC34A1Q06495 639 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.4□□□□□ -1.07
PTPRK-219ENST00000531050 RFWD3Q6PCD5 774 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 KLHL35Q6PF15 583 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 PACS1Q6VY07 963 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 NOSTRINQ8IVI9 506 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 FAM133AQ8N9E0 248 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 SCFD2Q8WU76 684 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 MAML3Q96JK9 1138 aa8.4□□□□□ -1.07
PTPRK-219ENST00000531050 ZNF184Q99676 751 aaPredicted RBP8.4□□□□□ -1.07
PTPRK-219ENST00000531050 TUT1Q9H6E5 874 aaKnown RBP8.4□□□□□ -1.07
PTPRK-219ENST00000531050 MYH2Q9UKX2 1941 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 ZNF142P52746 1687 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 RGPD2P0DJD1 1756 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 SMIM23A6NLE4 172 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 OR6B1O95007 311 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 T-ENOLP0DO92 83 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 HSPD1P10809 573 aaKnown RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 HNRNPH3P31942 346 aaKnown RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 MAGEA1P43355 309 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 DNM2P50570 870 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 ARFIP2P53365 341 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 ANTXR2P58335 489 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 PDE1BQ01064 536 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 LRRC14Q15048 493 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 SPDYCQ5MJ68 293 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 NEPROQ6NW34 567 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 NME8Q8N427 588 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 ABTB2Q8N961 1025 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 FNDC8Q8TC99 324 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 SEC14L1Q92503 715 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 EPSTI1Q96J88 318 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 KIAA1683Q9H0B3 1180 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 BABAM1Q9NWV8 329 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 RABL2BQ9UNT1 228 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 PCDHB6Q9Y5E3 794 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 N6AMT1Q9Y5N5 214 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 LMO7Q8WWI1 1683 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 PI4KAP2A4QPH2 592 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 UBE2Q2LH0YL09 131 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 H7C1D1 291 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 RGS16O15492 202 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 MAP3K7O43318 606 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 TBX10O75333 385 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 PALMO75781 387 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 AGTP01019 485 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 PLCG2P16885 1265 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 GTF2H1P32780 548 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 CYLC2Q14093 348 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 ZCWPW2Q504Y3 356 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 TNFAIP8L3Q5GJ75 292 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 MEI1Q5TIA1 1274 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 C4orf50Q6ZRC1 276 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 TRIM67Q6ZTA4 783 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 COL23A1Q86Y22 540 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms