RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 UPP2O95045 317 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 P4HBP07237 508 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 TMOD1P28289 359 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 MCM7P33993 719 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 PLA2G4FQ68DD2 849 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 NOSTRINQ8IVI9 506 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 ARNTL2Q8WYA1 636 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 MTMR9Q96QG7 549 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 OSMRQ99650 979 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 LXNQ9BS40 222 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 TMEM60Q9H2L4 133 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 TTC12Q9H892 705 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 SUGCTQ9HAC7 445 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 RGL1Q9NZL6 768 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 PCDHA12Q9UN75 941 aa20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 NOC2LQ9Y3T9 749 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-215ENST00000525334 PRUNE2Q8WUY3 3088 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 LINC01553A4QN01 128 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 EPOPA6NHQ4 379 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 DKC1O60832 514 aaKnown RBP eCLIP20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 IGFBP4P22692 258 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 TXKP42681 527 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 CRYBB1P53674 252 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 DYDC2Q96IM9 177 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 YME1L1Q96TA2 773 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 FTHL17Q9BXU8 183 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 TMX1Q9H3N1 280 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 ERVK-5Q9HDB9 667 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 KIF3AQ9Y496 699 aa20.75■□□□□ 0.91
TSPAN4-215ENST00000525334 RFXAPO00287 272 aa20.74■□□□□ 0.91
TSPAN4-215ENST00000525334 RPS6KA5O75582 802 aa20.74■□□□□ 0.91
TSPAN4-215ENST00000525334 CYP4A11Q02928 519 aa20.74■□□□□ 0.91
TSPAN4-215ENST00000525334 NFX1Q12986 1120 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-215ENST00000525334 DRP2Q13474 957 aa20.74■□□□□ 0.91
TSPAN4-215ENST00000525334 RTN4RL1Q86UN2 441 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-215ENST00000525334 SP7Q8TDD2 431 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-215ENST00000525334 ADAMTS10Q9H324 1103 aa20.74■□□□□ 0.91
TSPAN4-215ENST00000525334 COL4A6Q14031 1691 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 IGKV6-21A0A0C4DH24 114 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 U2AF2P26368 475 aaKnown RBP eCLIP20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 GJB2P29033 226 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 NLRP11P59045 1033 aaKnown RBP20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 ORC2Q13416 577 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 CTTNQ14247 550 aaKnown RBP20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 ZNF174Q15697 407 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 TTC38Q5R3I4 469 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 FAM228AQ86W67 206 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 C4orf19Q8IY42 314 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 ZNF668Q96K58 619 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 EIF2AK1Q9BQI3 630 aaKnown RBP20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 TSPYL2Q9H2G4 693 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 CYP26B1Q9NR63 512 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 ST3GAL5Q9UNP4 418 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 COL4A4P53420 1690 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 TRANK1O15050 2925 aa20.73■□□□□ 0.91
TSPAN4-215ENST00000525334 MAFO75444 373 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 POU3F3P20264 500 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 YWHABP31946 246 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 GPC3P51654 580 aa20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 NPEPPSP55786 919 aa20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 ODR4Q5SWX8 454 aa20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 ZNF579Q8NAF0 562 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 CEP170P1Q96L14 293 aa20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 TGS1Q96RS0 853 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 ZSWIM4Q9H7M6 989 aa20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 MTUS1Q9ULD2 1270 aa20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 NOL7Q9UMY1 257 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-215ENST00000525334 TTC3P53804 2025 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 POTEMA6NI47 508 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 DLL1O00548 723 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 GPR182O15218 404 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 MGEA5O60502 916 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 SLITRK3O94933 977 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 OR52Z1P0C646 297 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 TRAPPC10P48553 1259 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 ERVK-21P61565 698 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 NBR1Q14596 966 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 TPH2Q8IWU9 490 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 ZNF710Q8N1W2 664 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 PPM1EQ8WY54 764 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 SCLT1Q96NL6 688 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 HSD17B14Q9BPX1 270 aa20.71■□□□□ 0.91
TSPAN4-215ENST00000525334 ARID2Q68CP9 1835 aa20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 ZBTB39O15060 712 aa20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 DNM2P50570 870 aa20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 NEK9Q8TD19 979 aa20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 NLRP7Q8WX94 980 aa20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 JPH2Q9BR39 696 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 RC3H2Q9HBD1 1191 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 SMC3Q9UQE7 1217 aa20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 PPME1Q9Y570 386 aa20.7■□□□□ 0.9
TSPAN4-215ENST00000525334 LYPLA2O95372 231 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 DARSP14868 501 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 EIF4BP23588 611 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 TOB1P50616 345 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 POLGP54098 1239 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 GRB10Q13322 594 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 CCDC85BQ15834 202 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 FAM43BQ6ZT52 329 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 OTUD6AQ7L8S5 288 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms