RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 SYCP1Q15431 976 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 ZRSR1Q15695 479 aaKnown RBP7.62□□□□□ -1.19
SPIDR-218ENST00000522222 MARCH8Q5T0T0 291 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 PPP4R3AQ6IN85 833 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 SWSAP1Q6NVH7 229 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 TAF2Q6P1X5 1199 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 B3GNT9Q6UX72 402 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 Q7L0L9 218 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 BRAPQ7Z569 592 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 RPUSD2Q8IZ73 545 aaKnown RBP7.62□□□□□ -1.19
SPIDR-218ENST00000522222 RDM1Q8NG50 284 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 KIAA1524Q8TCG1 905 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 CHAMP1Q96JM3 812 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 NAP1L4Q99733 375 aaKnown RBP7.62□□□□□ -1.19
SPIDR-218ENST00000522222 OSBPL7Q9BZF2 842 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 FTOQ9C0B1 505 aaKnown RBP eCLIP7.62□□□□□ -1.19
SPIDR-218ENST00000522222 FAM49AQ9H0Q0 323 aaPredicted RBP7.62□□□□□ -1.19
SPIDR-218ENST00000522222 DISC1Q9NRI5 854 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 ANO10Q9NW15 660 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 DACT1Q9NYF0 836 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 GABBR1Q9UBS5 961 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 VAV3Q9UKW4 847 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 FARP1Q9Y4F1 1045 aaPredicted RBP7.62□□□□□ -1.19
SPIDR-218ENST00000522222 SAMM50Q9Y512 469 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 PCDHA10Q9Y5I2 948 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 KAT6AQ92794 2004 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 WDR81Q562E7 1941 aa7.62□□□□□ -1.19
SPIDR-218ENST00000522222 COL1A2P08123 1366 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 MYH9P35579 1960 aaKnown RBP7.61□□□□□ -1.19
SPIDR-218ENST00000522222 PTPRSQ13332 1948 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 A0A1W2PQ27 194 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 A0A1W2PQ64 194 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 A0A1W2PQD8 194 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 RSPH10B2B2RC85 870 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 KIF28PB7ZC32 967 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 KIF2AO00139 706 aaPredicted RBP7.61□□□□□ -1.19
SPIDR-218ENST00000522222 EML1O00423 815 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 HBP1O60381 514 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 PARNO95453 639 aaKnown RBP7.61□□□□□ -1.19
SPIDR-218ENST00000522222 C22orf31O95567 290 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 OATP04181 439 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 TUBB4AP04350 444 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 RSPH10BP0C881 870 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 ACTN1P12814 892 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 DNAJB2P25686 324 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 SFNP31947 248 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 ZNF165P49910 485 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 MGAT3Q09327 533 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 PPP2R5CQ13362 524 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 GPR153Q6NV75 609 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 CNKSR3Q6P9H4 555 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 MIER3Q7Z3K6 550 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 CKAP2LQ8IYA6 745 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 CEP57L1Q8IYX8 460 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 FBXO18Q8NFZ0 1043 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 KCNG4Q8TDN1 519 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 DNAJB3Q8WWF6 145 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 HAS1Q92839 578 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 MRFAP1L1Q96HT8 127 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 FAM167AQ96KS9 214 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 FAM20AQ96MK3 541 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 RCOR1Q9UKL0 485 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 MAFBQ9Y5Q3 323 aaPredicted RBP7.61□□□□□ -1.19
SPIDR-218ENST00000522222 SLC4A7Q9Y6M7 1214 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 GBF1Q92538 1859 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 SZT2Q5T011 3432 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 MICAL3Q7RTP6 2002 aa7.61□□□□□ -1.19
SPIDR-218ENST00000522222 LAMA2P24043 3122 aaKnown RBP7.61□□□□□ -1.19
SPIDR-218ENST00000522222 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 TMEM150BA6NC51 233 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 TBX3O15119 743 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 BAIAP3O94812 1187 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 YEATS4O95619 227 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 CHRNA1P02708 482 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 GHRP10912 638 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 ATP2A2P16615 1042 aaKnown RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 ATP2B1P20020 1258 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 PBX2P40425 430 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 RABGGTBP53611 331 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 GSDMDP57764 484 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 WDR5P61964 334 aaKnown RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 DEFB103AP81534 67 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 MRPS6P82932 125 aaKnown RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 PLCB2Q00722 1185 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 FAM160A1Q05DH4 1040 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 SPIRE1Q08AE8 756 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 CALCRLQ16602 461 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 ANO6Q4KMQ2 910 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 ZNF484Q5JVG2 852 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 FAM26DQ5JW98 314 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 ZNF697Q5TEC3 545 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 NCAPH2Q6IBW4 605 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 MTHFD1LQ6UB35 978 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 TRMT1LQ7Z2T5 733 aaKnown RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 RPAINQ86UA6 219 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 RSPH3Q86UC2 560 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 FERMT3Q86UX7 667 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 NOSTRINQ8IVI9 506 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 DEFB123Q8N688 67 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms