RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CLDN23Q96B33 292 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 MYADMQ96S97 322 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 MYL10Q9BUA6 226 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 RPP25Q9BUL9 199 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 SLC2A4RGQ9NR83 387 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 SETD4Q9NVD3 440 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 MTMR4Q9NYA4 1195 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 MIA3Q5JRA6 1907 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 APC2O95996 2303 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 ZNF532Q9HCE3 1301 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 FAM170BA6NMN3 283 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 HMMRO75330 724 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 GNAI3P08754 354 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 GSPT1P15170 499 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 CD72P21854 359 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 MCCP23508 829 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 CD52P31358 61 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 ZNF252P-AS1Q0IIN9 211 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 SRSF5Q13243 272 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 LAMC2Q13753 1193 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 BECN1Q14457 450 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 LETM2Q2VYF4 491 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 FAM102BQ5T8I3 360 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 TTC22Q5TAA0 569 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 SLC9C2Q5TAH2 1124 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 RNF207Q6ZRF8 634 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 LRRC55Q6ZSA7 311 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 KCTD1Q719H9 257 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 TMC7Q7Z402 723 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 DNERQ8NFT8 737 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 GMCL1Q96IK5 515 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 FAM126AQ9BYI3 521 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 OSBPL6Q9BZF3 934 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 ATP8A2Q9NTI2 1148 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 EPS15L1Q9UBC2 864 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 RAB23Q9ULC3 237 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 FRMPD2Q68DX3 1309 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 ACACAQ13085 2346 aa8.51□□□□□ -1.05
CTNNA1-227ENST00000521387 MYH4Q9Y623 1939 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 PNMA6EA0A0J9YXQ4 647 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 SHISA7A6NL88 538 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 EIF4E1BA6NMX2 242 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 SORBS3O60504 671 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 CHGBP05060 677 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 PBX3P40426 434 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 NOVA1P51513 510 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 GPC5P78333 572 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 TROAPQ12815 778 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 SNW1Q13573 536 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 WTAPQ15007 396 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 PROX2Q3B8N5 592 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 AASDHQ4L235 1098 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 FNDC1Q4ZHG4 1894 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 SPOUT1Q5T280 376 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 STK11IPQ8N1F8 1099 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 BBXQ8WY36 941 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 TBC1D5Q92609 795 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 CCDC8Q9H0W5 538 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 TMX1Q9H3N1 280 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 BCAS3Q9H6U6 928 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 DZANK1Q9NVP4 752 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 SYNPO2Q9UMS6 1093 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 RAI2Q9Y5P3 530 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 C2orf16Q68DN1 1984 aa8.5□□□□□ -1.05
CTNNA1-227ENST00000521387 MYO9AB2RTY4 2548 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 ABCA12Q86UK0 2595 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 TBKBP1A7MCY6 615 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 ANHXE9PGG2 379 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 H3BRB1 525 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 ARHGAP6O43182 974 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 FOXD2O60548 495 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 CDC45O75419 566 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 STAG3L1P0CL83 205 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 SCG2P13521 617 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 TARSP26639 723 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 MTAPQ13126 283 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 G3BP1Q13283 466 aaKnown RBP eCLIP8.49□□□□□ -1.051e-8■■■□□ 15.5
CTNNA1-227ENST00000521387 SIM2Q14190 667 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 UBXN2BQ14CS0 331 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 TTBK2Q6IQ55 1244 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 TSHZ1Q6ZSZ6 1077 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 ANKK1Q8NFD2 765 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 EAF2Q96CJ1 260 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 TAAR1Q96RJ0 339 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 TUT1Q9H6E5 874 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 LTB4R2Q9NPC1 389 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 COL20A1Q9P218 1284 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 PUF60Q9UHX1 559 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 NEUROG3Q9Y4Z2 214 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 COL12A1Q99715 3063 aa8.49□□□□□ -1.05
CTNNA1-227ENST00000521387 SPTAN1Q13813 2472 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 DOPEY1Q5JWR5 2465 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 CACNA1EQ15878 2313 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 HYAL3O43820 417 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 MGEA5O60502 916 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 MBD4O95243 580 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 TTLL1O95922 423 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms