RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 P4HBP07237 508 aaKnown RBP15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 TMOD1P28289 359 aa15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 CRYBB1P53674 252 aaPredicted RBP15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 NFX1Q12986 1120 aaKnown RBP15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 DRP2Q13474 957 aa15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 DYDC2Q96IM9 177 aa15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 ZNF668Q96K58 619 aaPredicted RBP15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 MAP7D2Q96T17 732 aa15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 YME1L1Q96TA2 773 aa15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 ADAMTS10Q9H324 1103 aa15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 ERVK-5Q9HDB9 667 aa15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 MTUS1Q9ULD2 1270 aa15.82■□□□□ 0.12
PDGFRB-202ENST00000517488 MGEA5O60502 916 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 RPS6KA5O75582 802 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 MCM7P33993 719 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 TXKP42681 527 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 NPEPPSP55786 919 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 NLRP11P59045 1033 aaKnown RBP15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 CYP4A11Q02928 519 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 CTTNQ14247 550 aaKnown RBP15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 ZNF174Q15697 407 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 FAM228AQ86W67 206 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 PPM1EQ8WY54 764 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 LXNQ9BS40 222 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 BACH2Q9BYV9 841 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 TSPYL2Q9H2G4 693 aaPredicted RBP15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 TTC12Q9H892 705 aaPredicted RBP15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 PCDHA12Q9UN75 941 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 ST3GAL5Q9UNP4 418 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 UNC80Q8N2C7 3258 aa15.81■□□□□ 0.12
PDGFRB-202ENST00000517488 PTPRSQ13332 1948 aa15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 GBF1Q92538 1859 aa15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 IGKV6-21A0A0C4DH24 114 aa15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 ERVK-21P61565 698 aa15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 NOSTRINQ8IVI9 506 aa15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 TGS1Q96RS0 853 aaKnown RBP15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 C17orf80Q9BSJ5 609 aa15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 FTHL17Q9BXU8 183 aa15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 SPTBN5Q9NRC6 3674 aaKnown RBP15.8■□□□□ 0.12
PDGFRB-202ENST00000517488 ZBTB39O15060 712 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 GPR182O15218 404 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 LPXNO60711 386 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 DKC1O60832 514 aaKnown RBP eCLIP15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 MAFO75444 373 aaPredicted RBP15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 SLITRK3O94933 977 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 MCM2P49736 904 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 GPC3P51654 580 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 GRB10Q13322 594 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 GNL2Q13823 731 aaKnown RBP15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 CCDC85BQ15834 202 aaPredicted RBP15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 TPH2Q8IWU9 490 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 C4orf19Q8IY42 314 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 CRIPAKQ8N1N5 446 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 GDPD5Q8WTR4 605 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 CEP170P1Q96L14 293 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 HSD17B14Q9BPX1 270 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 EIF2AK1Q9BQI3 630 aaKnown RBP15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 ZSWIM4Q9H7M6 989 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 CYP26B1Q9NR63 512 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
PDGFRB-202ENST00000517488 MICAL3Q7RTP6 2002 aa15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 SIP14410 1827 aa15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 IBSPP21815 317 aaPredicted RBP15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 EIF4BP23588 611 aaKnown RBP15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 U2AF2P26368 475 aaKnown RBP eCLIP15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 NBR1Q14596 966 aa15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 TTC38Q5R3I4 469 aa15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 ADAM2Q99965 735 aa15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 RC3H2Q9HBD1 1191 aaKnown RBP15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 PRDM6Q9NQX0 595 aa15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 SUCLA2Q9P2R7 463 aaPredicted RBP15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 MTCH2Q9Y6C9 303 aa15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 MYH9P35579 1960 aaKnown RBP15.78■□□□□ 0.12
PDGFRB-202ENST00000517488 POTEMA6NI47 508 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 CSDE1O75534 798 aaKnown RBP15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 DGKIO75912 1065 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 DARSP14868 501 aaKnown RBP15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 POU3F3P20264 500 aaPredicted RBP15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 FGFR4P22455 802 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 GJB2P29033 226 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 TRAPPC10P48553 1259 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 TOB1P50616 345 aaPredicted RBP15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 DSC3Q14574 896 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 NPAS4Q8IUM7 802 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 KSR1Q8IVT5 923 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 ZNF710Q8N1W2 664 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 MICALL1Q8N3F8 863 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 NLRP7Q8WX94 980 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 SCLT1Q96NL6 688 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 DHX33Q9H6R0 707 aaKnown RBP15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 RGS18Q9NS28 235 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 KIF3AQ9Y496 699 aa15.77■□□□□ 0.12
PDGFRB-202ENST00000517488 A0A087WWV3 80 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 DENND3A2RUS2 1198 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 C9IYK1 514 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms