RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 LAG3P18627 525 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 MARK3P27448 753 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 METAP2P50579 478 aaKnown RBP eCLIP3.81□□□□□ -1.8
CHD1-211ENST00000514344 PLCB3Q01970 1234 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 MGAT3Q09327 533 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 MTAPQ13126 283 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 PAK2Q13177 524 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 STPG1Q5TH74 334 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 RSPH3Q86UC2 560 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 CLUAP1Q96AJ1 413 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 MYADMQ96S97 322 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 USP26Q9BXU7 913 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 FTHL17Q9BXU8 183 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 CWH43Q9H720 699 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 ZNF287Q9HBT7 754 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 TUBE1Q9UJT0 475 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 SYNPO2Q9UMS6 1093 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 LZTS1Q9Y250 596 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 EXOC6BQ9Y2D4 811 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 NUMBLQ9Y6R0 609 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 CACNA1EQ15878 2313 aa3.81□□□□□ -1.8
CHD1-211ENST00000514344 DOCK5Q9H7D0 1870 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 MGAQ8IWI9 3026 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 CCDC171Q6TFL3 1326 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 PTPN13Q12923 2485 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 F5P12259 2224 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 DENND3A2RUS2 1198 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 TMEM8BA6NDV4 472 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 TSPY2A6NKD2 308 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 GSG1L2A8MUP6 293 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 MGEA5O60502 916 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 CFBP00751 764 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 STARD6P59095 220 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 ADAM17P78536 824 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 TAF2Q6P1X5 1199 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 GET4Q7L5D6 327 aaPredicted RBP3.8□□□□□ -1.8
CHD1-211ENST00000514344 VPS52Q8N1B4 723 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 NEDD1Q8NHV4 660 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 SYTL5Q8TDW5 730 aaPredicted RBP3.8□□□□□ -1.8
CHD1-211ENST00000514344 SHDQ96IW2 340 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 ADAM2Q99965 735 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 API5Q9BZZ5 524 aaKnown RBP3.8□□□□□ -1.8
CHD1-211ENST00000514344 BOLA2Q9H3K6 86 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 TMX1Q9H3N1 280 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 SFXN1Q9H9B4 322 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 DZANK1Q9NVP4 752 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 PAG1Q9NWQ8 432 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 NRCAMQ92823 1304 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 APC2O95996 2303 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 LRP3O75074 770 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 SARSP49591 514 aaKnown RBP3.8□□□□□ -1.8
CHD1-211ENST00000514344 ZBTB41Q5SVQ8 909 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 HEATR6Q6AI08 1181 aaKnown RBP3.8□□□□□ -1.8
CHD1-211ENST00000514344 LRRC55Q6ZSA7 311 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 CYFIP1Q7L576 1253 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 CELF5Q8N6W0 485 aaKnown RBP3.8□□□□□ -1.8
CHD1-211ENST00000514344 RNF169Q8NCN4 708 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 GLG1Q92896 1179 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 BORCS6Q96GS4 357 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 LRIG1Q96JA1 1093 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 ZNF558Q96NG5 402 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 LSM14BQ9BX40 385 aaKnown RBP3.8□□□□□ -1.8
CHD1-211ENST00000514344 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.8□□□□□ -1.8
CHD1-211ENST00000514344 OCEL1Q9H607 264 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 IL17RBQ9NRM6 502 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 SPG21Q9NZD8 308 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 ZNF215Q9UL58 517 aaPredicted RBP3.8□□□□□ -1.8
CHD1-211ENST00000514344 TNNQ9UQP3 1299 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 GPSM3Q9Y4H4 160 aa3.8□□□□□ -1.8
CHD1-211ENST00000514344 M0QZ92 97 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 AXIN1O15169 862 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 HYAL3O43820 417 aaPredicted RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 RFPL2O75678 378 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 SSBP05455 408 aaKnown RBP eCLIP3.79□□□□□ -1.8
CHD1-211ENST00000514344 TARSP26639 723 aaKnown RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 PPM1AP35813 382 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 MRPS6P82932 125 aaKnown RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 ALDH1L2Q3SY69 923 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 SBK1Q52WX2 424 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 TMEM173Q86WV6 379 aaPredicted RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 ABI1Q8IZP0 508 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 SSH3Q8TE77 659 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 HNRNPLLQ8WVV9 542 aaKnown RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 NELL1Q92832 810 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 FGF14Q92915 247 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 IWS1Q96ST2 819 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 PPP1R16BQ96T49 567 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 MKNK1Q9BUB5 465 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 ARRDC1-AS1Q9H2J1 176 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 EPB41L4AQ9HCS5 686 aaPredicted RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 LTB4R2Q9NPC1 389 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 PXMP2Q9NR77 195 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 WASF3Q9UPY6 502 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 SPTAN1Q13813 2472 aaKnown RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 MYH7P12883 1935 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 MYH15Q9Y2K3 1946 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 CCDC195A0A1B0GUA6 201 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 HRO43593 1189 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 GOLGA8HP0CJ92 632 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 LAMP2P13473 410 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms