RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 FANCBQ8NB91 859 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 MSANTD4Q8NCY6 345 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 GABPB2Q8TAK5 448 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 PPP1R14BQ96C90 147 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 TBC1D31Q96DN5 1066 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 CFHR5Q9BXR6 569 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 CCDC68Q9H2F9 335 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 PIDD1Q9HB75 910 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 ZMAT5Q9UDW3 170 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 FEM1BQ9UK73 627 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 ADAMTS5Q9UNA0 930 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 LIMCH1Q9UPQ0 1083 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 TTLL3Q9Y4R7 772 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 FRMPD2Q68DX3 1309 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 DYTNA2CJ06 578 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 LARGE1O95461 756 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 FGFR1OPO95684 399 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 RXRAP19793 462 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 METAP2P50579 478 aaKnown RBP eCLIP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 STAT2P52630 851 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 CSE1LP55060 971 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 GSDMDP57764 484 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 FUT2Q10981 343 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 EIF2B5Q13144 721 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 CUL4AQ13619 759 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 ME3Q16798 604 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 SLC35G1Q2M3R5 365 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 TMTC3Q6ZXV5 915 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 KCTD1Q719H9 257 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 IGSF22Q8N9C0 903 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 VPS37AQ8NEZ2 397 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 LEO1Q8WVC0 666 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 STAMBPL1Q96FJ0 436 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 ZSCAN31Q96LW9 406 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 ASCC2Q9H1I8 757 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 PPP1R9AQ9ULJ8 1098 aa10.48□□□□□ -0.73
PDLIM5-207ENST00000503974 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 HMGB1P1B2RPK0 211 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 PDHXO00330 501 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 BUB1BO60566 1050 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 LDHAP00338 332 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 CDC27P30260 824 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 DSG3P32926 999 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 PLOD1Q02809 727 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 KCNA1Q09470 495 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 ST3GAL1Q11201 340 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 IRF5Q13568 498 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 NTRK3Q16288 839 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 RTN1Q16799 776 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 USH1GQ495M9 461 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 TTBK2Q6IQ55 1244 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 UBE2Q1Q7Z7E8 422 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 C14orf80Q86SX3 495 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 HOMER1Q86YM7 354 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 RAB11FIP4Q86YS3 637 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 MORC4Q8TE76 937 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 SREK1Q8WXA9 508 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 MTMR8Q96EF0 704 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 MAML3Q96JK9 1138 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 SLF1Q9BQI6 1058 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 SPZ1Q9BXG8 430 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 TANGO6Q9C0B7 1094 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 OCEL1Q9H607 264 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 RIOX1Q9H6W3 641 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 SYNCQ9H7C4 482 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 SH2B1Q9NRF2 756 aaPredicted RBP10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 FBXO28Q9NVF7 368 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 SLC5A4Q9NY91 659 aa10.47□□□□□ -0.73
PDLIM5-207ENST00000503974 KLRF2D3W0D1 207 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 STXBP3O00186 592 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 ABLIM1O14639 778 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 SART1O43290 800 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 CYTH3O43739 400 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 MTRF1O75570 445 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 LUC7L3O95232 432 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 GOLGA8HP0CJ92 632 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 FOSL1P15407 271 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 OSBPP22059 807 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 IL4RP24394 825 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 GRM1Q13255 1194 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 COG2Q14746 738 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 ARHGEF6Q15052 776 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 CCDC121Q6ZUS5 278 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 TEX9Q8N6V9 391 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 REPS2Q8NFH8 660 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 GTF3C2Q8WUA4 911 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 CHURC1Q8WUH1 139 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 HPS3Q969F9 1004 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 INTS4Q96HW7 963 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 SNX27Q96L92 541 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 ANKZF1Q9H8Y5 726 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 PRR12Q9ULL5 1215 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 PRELID1Q9Y255 219 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 EFR3BQ9Y2G0 817 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 L3MBTL1Q9Y468 752 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms