RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ZDHHC11BP0C7U3 371 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ZFXP17010 805 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC174Q6PII3 467 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF365Q70YC5 407 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ADSSL1Q8N142 457 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 STAMBPL1Q96FJ0 436 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM7Q9C029 511 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ABCF2Q9UG63 623 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 PPP2R2CQ9Y2T4 447 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 STARD13Q9Y3M8 1113 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 STK24Q9Y6E0 443 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CXCL10P02778 98 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 TGFB3P10600 412 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ABCD1P33897 745 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CYLC1P35663 651 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 DGKZQ13574 1117 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 MTMR3Q13615 1198 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 DDB1Q16531 1140 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 MYSM1Q5VVJ2 828 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 BHLHA9Q7RTU4 235 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CD302Q8IX05 232 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 TSC22D3Q99576 134 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 FAM192AQ9GZU8 254 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 GDPD2Q9HCC8 539 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 IRAK4Q9NWZ3 460 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CIDEBQ9UHD4 219 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 MTMR7Q9Y216 660 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ZBTB12Q9Y330 459 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 GTPBP6O43824 516 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 HNRNPCL1O60812 293 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 GADD45BO75293 160 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 E2F6O75461 281 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ATP5HO75947 161 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 EDN1P05305 212 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 VIMP08670 466 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CALM1P0DP23 149 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CALM2P0DP24 149 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CALM3P0DP25 149 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 KCNA5P22460 613 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CASP14P31944 242 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ME1P48163 572 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 LIMK1P53667 647 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 SESN3P58005 492 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ST5P78524 1137 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 FANCCQ00597 558 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CAP1Q01518 475 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 PTPN11Q06124 597 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 PPATQ06203 517 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CKAP2LQ8IYA6 745 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 SEPT12Q8IYM1 358 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 FERMT2Q96AC1 680 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 DBNDD2Q9BQY9 259 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 MFRPQ9BY79 579 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 BHMT2Q9H2M3 363 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 BARHL2Q9NY43 387 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 HECAQ9UBI9 543 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 DENND2AQ9ULE3 1009 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 SH3BP1Q9Y3L3 701 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 E7ESA3 106 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 USO1O60763 962 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CCND1P24385 295 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 RASSF2P50749 326 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF543Q08ER8 600 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 SAFB2Q14151 953 aaKnown RBP eCLIP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 NAA30Q147X3 362 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 AGERQ15109 404 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 SLC4A8Q2Y0W8 1093 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 HSP90AA5PQ58FG0 334 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CMPK2Q5EBM0 449 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 PAPD7Q5XG87 772 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 KIAA0907Q7Z7F0 614 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 VSIG10LQ86VR7 867 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 VSTM4Q8IW00 320 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 LRRC43Q8N309 656 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 OGFOD1Q8N543 542 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 OR8K1Q8NGG5 319 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 WHAMMQ8TF30 809 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 RRP36Q96EU6 259 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 DHRS4Q9BTZ2 278 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 PNPLA8Q9NP80 782 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 PAPOLBQ9NRJ5 636 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 ANGEL1Q9UNK9 670 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 FAM177BA6PVY3 158 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 PDLIM1O00151 329 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CXCL11O14625 94 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 BIRC5O15392 142 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 GUSBP08236 651 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 GJB2P29033 226 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 GBP1P32455 592 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 HSPA1LP34931 641 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 GTF2BQ00403 316 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 AIMP1Q12904 312 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 IFI16Q16666 785 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 GPATCH4Q5T3I0 446 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 MSL1Q68DK7 614 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 LHX8Q68G74 356 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 FSIP1Q8NA03 581 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 CENPIQ92674 756 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 TATDN2Q93075 761 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 SPDL1Q96EA4 605 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms