RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 PPME1Q9Y570 386 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 MTCH2Q9Y6C9 303 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 DGKIO75912 1065 aa12.26□□□□□ -0.45
SHROOM3-210ENST00000497440 CDC42EP1Q00587 391 aa12.26□□□□□ -0.45
SHROOM3-210ENST00000497440 C4orf32Q8N8J7 132 aa12.26□□□□□ -0.45
SHROOM3-210ENST00000497440 TGS1Q96RS0 853 aaKnown RBP12.26□□□□□ -0.45
SHROOM3-210ENST00000497440 BRMS1Q9HCU9 246 aa12.26□□□□□ -0.45
SHROOM3-210ENST00000497440 RGS18Q9NS28 235 aa12.26□□□□□ -0.45
SHROOM3-210ENST00000497440 SAMM50Q9Y512 469 aa12.26□□□□□ -0.45
SHROOM3-210ENST00000497440 C9IYK1 514 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 C5orf67F2Z3F1 127 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 CHMP2AO43633 222 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 EIF4BP23588 611 aaKnown RBP12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 TRAPPC10P48553 1259 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 GPC3P51654 580 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 TMEM62Q0P6H9 643 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 DRP2Q13474 957 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 EFCAB12Q6NXP0 572 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 FAM228AQ86W67 206 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 MYOCDQ8IZQ8 938 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 SLC17A8Q8NDX2 589 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 TMX3Q96JJ7 454 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 SAMD11Q96NU1 681 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 GAS2L1Q99501 681 aaPredicted RBP12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 TRAIPQ9BWF2 469 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 BACH2Q9BYV9 841 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 TMEM60Q9H2L4 133 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 DHX33Q9H6R0 707 aaKnown RBP12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 TCEAL9Q9UHQ7 104 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 PCDHA12Q9UN75 941 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 ST3GAL5Q9UNP4 418 aa12.25□□□□□ -0.45
SHROOM3-210ENST00000497440 RFXAPO00287 272 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 MGEA5O60502 916 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 DKC1O60832 514 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 RPS6KA5O75582 802 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 XRCC6P12956 609 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 MCM2P49736 904 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 TOB1P50616 345 aaPredicted RBP12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 GRB10Q13322 594 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 C8orf76Q96K31 380 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 CYP26B1Q9NR63 512 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 RGL1Q9NZL6 768 aa12.24□□□□□ -0.45
SHROOM3-210ENST00000497440 TMEM150BA6NC51 233 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 H3BNC9 293 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 M0QZ92 97 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 GPR182O15218 404 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 VTNP04004 478 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 RB1P06400 928 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 SPATA31C1P0DKV0 1188 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 DARSP14868 501 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 TMOD1P28289 359 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 CLCN3P51790 818 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 NLRP11P59045 1033 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 PAK2Q13177 524 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 TRIM29Q14134 588 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 COL19A1Q14993 1142 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 KIZQ2M2Z5 673 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 EPC2Q52LR7 807 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 ODR4Q5SWX8 454 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 SLC24A5Q71RS6 500 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 NPAS4Q8IUM7 802 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 NOSTRINQ8IVI9 506 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 LRRC71Q8N4P6 559 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 METTL13Q8N6R0 699 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 BANK1Q8NDB2 785 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 C17orf80Q9BSJ5 609 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 ELAC1Q9H777 363 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 ZSWIM4Q9H7M6 989 aa12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 TTC12Q9H892 705 aaPredicted RBP12.23□□□□□ -0.45
SHROOM3-210ENST00000497440 ZBTB39O15060 712 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 ST18O60284 1047 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 NEMFO60524 1076 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 BAG4O95429 457 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 SARSP49591 514 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 NPEPPSP55786 919 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 POU5F1BQ06416 359 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 CUL4AQ13619 759 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 CALCRLQ16602 461 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 TMEM266Q2M3C6 531 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 ZNF410Q86VK4 478 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 CMTR2Q8IYT2 770 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 NEK9Q8TD19 979 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 ARNTL2Q8WYA1 636 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 OSMRQ99650 979 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 EIF2AK1Q9BQI3 630 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 JPH2Q9BR39 696 aaPredicted RBP12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 LXNQ9BS40 222 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 CERS4Q9HA82 394 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 IFT122Q9HBG6 1241 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 C1orf112Q9NSG2 853 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 ANKEF1Q9NU02 776 aa12.22□□□□□ -0.45
SHROOM3-210ENST00000497440 ADGRA3Q8IWK6 1321 aa12.21□□□□□ -0.45
SHROOM3-210ENST00000497440 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms