RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 ZNFX1Q9P2E3 1918 aaKnown RBP3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 SASH1O94885 1247 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 TNNI3KQ59H18 835 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 NT5DC1Q5TFE4 455 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 LIPIQ6XZB0 460 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 TMEM151BQ8IW70 566 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 PEX11GQ96HA9 241 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 CHAMP1Q96JM3 812 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 PKNOX2Q96KN3 472 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 BDH2Q9BUT1 245 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 JAM3Q9BX67 310 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 RTEL1Q9NZ71 1219 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 DISP2A7MBM2 1401 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 ZNF609O15014 1411 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 TTC21BQ7Z4L5 1316 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 KLF4O43474 513 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 SMARCA5O60264 1052 aaPredicted RBP3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 FRAT2O75474 233 aaPredicted RBP3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 ITGA1P56199 1179 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 TARBP2Q15633 366 aaKnown RBP3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 FXNQ16595 210 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 CD300LDQ6UXZ3 194 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 ETV3LQ6ZN32 361 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 SPATC1Q76KD6 591 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 DIO2Q92813 273 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 ARHGEF4Q9NR80 690 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 POGKQ9P215 609 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 KDM6AO15550 1401 aaPredicted RBP3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 CANXP27824 592 aaKnown RBP3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 RARSP54136 660 aaKnown RBP3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 NUCB1Q02818 461 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 CUL4AQ13619 759 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 NFIXQ14938 502 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 SLC35F1Q5T1Q4 408 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 KCNT2Q6UVM3 1135 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 MSL3Q8N5Y2 521 aaKnown RBP3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 RELTQ969Z4 430 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 TMEM169Q96HH4 297 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 RNF38Q9H0F5 515 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 ZBTB40Q9NUA8 1239 aa3.17□□□□□ -1.9
CDC42EP3-205ENST00000494083 DLX3O60479 287 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 SCG5P05408 212 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 CACNB2Q08289 660 aaPredicted RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 CRACR2BQ8N4Y2 399 aaPredicted RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 LUC7LQ9NQ29 371 aaKnown RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 PSME4Q14997 1843 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 MYH8P13535 1937 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 A0A0G2JMZ2 1700 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 LRRC37A2A6NM11 1700 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 MEFVO15553 781 aaPredicted RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 ZNF143P52747 638 aaPredicted RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 CR1LQ2VPA4 569 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 LCE5AQ5TCM9 118 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 EEPD1Q7L9B9 569 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 ZNF761Q86XN6 746 aaPredicted RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 SP8Q8IXZ3 490 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 Q8N1Y9 231 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 TRMT2BQ96GJ1 504 aaKnown RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 HIRIP3Q9BW71 556 aaPredicted RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 CCDC171Q6TFL3 1326 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 TRBV23OR9-2A0A075B6M9 112 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 ST20-MTHFSA0A0A6YYL1 179 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 LTFP02788 710 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 GNL2Q13823 731 aaKnown RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 NTRK3Q16288 839 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 USP53Q70EK8 1073 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 VPS37DQ86XT2 251 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 DCP2Q8IU60 420 aaKnown RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 ARHGAP45Q92619 1136 aa3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 TIMM13Q9Y5L4 95 aaPredicted RBP3.16□□□□□ -1.9
CDC42EP3-205ENST00000494083 COL4A4P53420 1690 aaPredicted RBP3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 RPL11P62913 178 aaKnown RBP3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 ADAM9Q13443 819 aa3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 MIB1Q86YT6 1006 aa3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 CARFQ8N187 725 aa3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 C11orf84Q9BUA3 381 aaPredicted RBP3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 CLDND1Q9NY35 253 aa3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 NUDT5Q9UKK9 219 aa3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 TRAF6Q9Y4K3 522 aa3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 EDC4Q6P2E9 1401 aaKnown RBP3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 ADAMTS13Q76LX8 1427 aa3.15□□□□□ -1.9
CDC42EP3-205ENST00000494083 CYP2C8P10632 490 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 HOXC12P31275 282 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 THBS2P35442 1172 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 LTBRP36941 435 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 MRE11P49959 708 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 PHF20Q9BVI0 1012 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 ALDH8A1Q9H2A2 487 aaPredicted RBP3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 RAPGEFL1Q9UHV5 662 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 PFDN2Q9UHV9 154 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 RPGRIP1LQ68CZ1 1315 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 A0A1W2PP64 1363 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 NID2Q14112 1375 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 CNR2P34972 360 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 KCNC1P48547 511 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 KLHL40Q2TBA0 621 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 BMP2KLQ5H9B9 411 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 MCTP2Q6DN12 878 aa3.15□□□□□ -1.91
CDC42EP3-205ENST00000494083 CPA5Q8WXQ8 436 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms