RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 RXFP3Q9NSD7 469 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 EPS15L1Q9UBC2 864 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 RCAN3Q9UKA8 241 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 PNMA2Q9UL42 364 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 MTCL1Q9Y4B5 1905 aaKnown RBP8.48□□□□□ -1.05
COL9A1-209ENST00000489861 CCDC171Q6TFL3 1326 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 IGSF9BQ9UPX0 1349 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 MBLAC1A4D2B0 266 aaPredicted RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 TMEM8BA6NDV4 472 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 FAM170BA6NMN3 283 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 C9IYK1 514 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 PDHBP11177 359 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 TDGF1P13385 188 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 CD72P21854 359 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 GBP2P32456 591 aaPredicted RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 CA8P35219 290 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 RBM25P49756 843 aaKnown RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 KRT17Q04695 432 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 TMEM62Q0P6H9 643 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 PAK2Q13177 524 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 SNW1Q13573 536 aaKnown RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 WTAPQ15007 396 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 NONOQ15233 471 aaKnown RBP eCLIP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 PPP4R3BQ5MIZ7 849 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 UTP14CQ5TAP6 766 aaKnown RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 KCNV1Q6PIU1 500 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 RSPH3Q86UC2 560 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 IFNL3Q8IZI9 196 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 ZCCHC14Q8WYQ9 949 aaKnown RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 ZNF558Q96NG5 402 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 BBC3Q96PG8 261 aaPredicted RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 PDCD2LQ9BRP1 358 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 RPP25Q9BUL9 199 aaKnown RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 ADAM33Q9BZ11 813 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 FAM49AQ9H0Q0 323 aaPredicted RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 SFXN1Q9H9B4 322 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 PRMT8Q9NR22 394 aaPredicted RBP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 SPG21Q9NZD8 308 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 TUBE1Q9UJT0 475 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.47□□□□□ -1.05
COL9A1-209ENST00000489861 SQORQ9Y6N5 450 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 CFAP46Q8IYW2 2715 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 KALRNO60229 2985 aa8.47□□□□□ -1.05
COL9A1-209ENST00000489861 BAZ2BQ9UIF8 2168 aaKnown RBP8.46□□□□□ -1.05
COL9A1-209ENST00000489861 ASCC3Q8N3C0 2202 aaKnown RBP8.46□□□□□ -1.05
COL9A1-209ENST00000489861 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.46□□□□□ -1.06
COL9A1-209ENST00000489861 TSPY2A6NKD2 308 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 NOP56O00567 594 aaKnown RBP8.46□□□□□ -1.06
COL9A1-209ENST00000489861 OPLAHO14841 1288 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 GPAA1O43292 621 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 GABBR2O75899 941 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 TGFB3P10600 412 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 PPM1AP35813 382 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 LIMK1P53667 647 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 GPC5P78333 572 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 ZNF543Q08ER8 600 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 PPFIA1Q13136 1202 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 UBXN2BQ14CS0 331 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 GRIK4Q16099 956 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 CYFIP1Q7L576 1253 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 VSIG10LQ86VR7 867 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 SLC39A11Q8N1S5 342 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 ADAM32Q8TC27 787 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 BBXQ8WY36 941 aaPredicted RBP8.46□□□□□ -1.06
COL9A1-209ENST00000489861 GLG1Q92896 1179 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 CASD1Q96PB1 797 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 ADAM2Q99965 735 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 TMEM47Q9BQJ4 181 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 MYL10Q9BUA6 226 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 LRRCC1Q9C099 1032 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 MAF1Q9H063 256 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 BCL11AQ9H165 835 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 ZBTB47Q9UFB7 747 aaPredicted RBP8.46□□□□□ -1.06
COL9A1-209ENST00000489861 ZNF215Q9UL58 517 aaPredicted RBP8.46□□□□□ -1.06
COL9A1-209ENST00000489861 RAB23Q9ULC3 237 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 SHROOM3Q8TF72 1996 aa8.46□□□□□ -1.06
COL9A1-209ENST00000489861 NT5C1B-RDH14C9J2C7 533 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 ANHXE9PGG2 379 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 GIPC1O14908 333 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 APPP05067 770 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 ZFYP08048 801 aaPredicted RBP8.45□□□□□ -1.06
COL9A1-209ENST00000489861 HSPD1P10809 573 aaKnown RBP8.45□□□□□ -1.06
COL9A1-209ENST00000489861 ATP5JP18859 108 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 GNAT2P19087 354 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 PPARAQ07869 468 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 FOXC1Q12948 553 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 NFX1Q12986 1120 aaKnown RBP8.45□□□□□ -1.06
COL9A1-209ENST00000489861 SEMA3FQ13275 785 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 FZD5Q13467 585 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 HTR4Q13639 388 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 PGM5Q15124 567 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 SF3A2Q15428 464 aaKnown RBP8.45□□□□□ -1.06
COL9A1-209ENST00000489861 PSAPL1Q6NUJ1 521 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 SLC24A5Q71RS6 500 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 VPS52Q8N1B4 723 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 CELF5Q8N6W0 485 aaKnown RBP8.45□□□□□ -1.06
COL9A1-209ENST00000489861 NXPE3Q969Y0 559 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 CLDN23Q96B33 292 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 SHDQ96IW2 340 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms