RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 PADI3Q9ULW8 664 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 GINS2Q9Y248 185 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 PCDHA10Q9Y5I2 948 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 MAFBQ9Y5Q3 323 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 SQORQ9Y6N5 450 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 TOB1P50616 345 aaPredicted RBP17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 CEBPZQ03701 1054 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 PAK2Q13177 524 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 GPM6BQ13491 265 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 LETM2Q2VYF4 491 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 RILPL1Q5EBL4 403 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 NEK8Q86SG6 692 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 KIAA0319LQ8IZA0 1049 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 LENG9Q96B70 501 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 UHRF1Q96T88 793 aaPredicted RBP17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 CDHR5Q9HBB8 845 aa17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 TFIP11Q9UBB9 837 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-219ENST00000486935 ZBTB42B2RXF5 422 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 H3BNC9 293 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 WNT7AO00755 349 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 MSH4O15457 936 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 COL1A2P08123 1366 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 KRT85P78386 507 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 NFX1Q12986 1120 aaKnown RBP17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 PTPROQ16827 1216 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 TMEM266Q2M3C6 531 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 METTL13Q8N6R0 699 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 LINC01599Q8WXQ3 324 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 GJA10Q969M2 543 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 USP28Q96RU2 1077 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 FTHL17Q9BXU8 183 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 IGSF9BQ9UPX0 1349 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 CLIC4Q9Y696 253 aa17.34■□□□□ 0.37
SEMA4D-219ENST00000486935 MYO9BQ13459 2157 aa17.33■□□□□ 0.37
SEMA4D-219ENST00000486935 WDR64B1ANS9 1081 aa17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 CHMP2AO43633 222 aa17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 GAS7O60861 476 aa17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 BAG4O95429 457 aaKnown RBP17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 IBSPP21815 317 aaPredicted RBP17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 TRAPPC10P48553 1259 aa17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 BTG3Q14201 252 aaPredicted RBP17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 ZNF174Q15697 407 aa17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 MRPL38Q96DV4 380 aaKnown RBP17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 NECAB3Q96P71 396 aaPredicted RBP17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 PPP1R16BQ96T49 567 aa17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 DISC1Q9NRI5 854 aa17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 PCDHB6Q9Y5E3 794 aa17.33■□□□□ 0.36
SEMA4D-219ENST00000486935 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 CCNT1O60563 726 aaKnown RBP17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 DGKIO75912 1065 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 TDP2O95551 362 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 C22orf31O95567 290 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 MCM7P33993 719 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 CTNNB1P35222 781 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 SF3A1Q15459 793 aaKnown RBP17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 SLC5A5Q92911 643 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 GBP4Q96PP9 640 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 RIT2Q99578 217 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 TMX1Q9H3N1 280 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 NRBP2Q9NSY0 501 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 CFAP45Q9UL16 551 aa17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 NOC2LQ9Y3T9 749 aaKnown RBP17.32■□□□□ 0.36
SEMA4D-219ENST00000486935 ADGRA3Q8IWK6 1321 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 RPS6KA5O75582 802 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 VTNP04004 478 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 BMPR1AP36894 532 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 KIZQ2M2Z5 673 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 Q4G0T1 1027 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 ATL3Q6DD88 541 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 ZNF689Q96CS4 500 aaPredicted RBP17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 FAM167AQ96KS9 214 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 TEKT3Q9BXF9 490 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 UNC45AQ9H3U1 944 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 GDPD2Q9HCC8 539 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 CEP131Q9UPN4 1083 aa17.31■□□□□ 0.36
SEMA4D-219ENST00000486935 MICAL3Q7RTP6 2002 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 CYP3A7-CYP3A51PA0A087WV96 503 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 RB1P06400 928 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 STAG3L1P0CL83 205 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 CYP3A7P24462 503 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 CRYBB1P53674 252 aaPredicted RBP17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 STK38Q15208 465 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 EFCAB12Q6NXP0 572 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 NPAS4Q8IUM7 802 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 TMEM40Q8WWA1 233 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 OSMRQ99650 979 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 NAP1L4Q99733 375 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 RC3H2Q9HBD1 1191 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 ERVK-5Q9HDB9 667 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 LRFN2Q9ULH4 789 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 ST3GAL5Q9UNP4 418 aa17.3■□□□□ 0.36
SEMA4D-219ENST00000486935 CUL9Q8IWT3 2517 aa17.29■□□□□ 0.36
SEMA4D-219ENST00000486935 PRRC2BQ5JSZ5 2229 aaKnown RBP17.29■□□□□ 0.36
SEMA4D-219ENST00000486935 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.29■□□□□ 0.36
SEMA4D-219ENST00000486935 DENND3A2RUS2 1198 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms