RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 PLIN2Q99541 437 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 POLR3CQ9BUI4 534 aaPredicted RBP12.68□□□□□ -0.38
PTPN18-212ENST00000483617 MLXIPQ9HAP2 919 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 TUFT1Q9NNX1 390 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 RMND1Q9NWS8 449 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 PKD2L1Q9P0L9 805 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 HDAC6Q9UBN7 1215 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 DACH1Q9UI36 760 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 VAV3Q9UKW4 847 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 DNM3Q9UQ16 869 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 SLC4A7Q9Y6M7 1214 aa12.68□□□□□ -0.38
PTPN18-212ENST00000483617 NFASCO94856 1347 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 WDR64B1ANS9 1081 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 GTPBP6O43824 516 aaPredicted RBP12.67□□□□□ -0.38
PTPN18-212ENST00000483617 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 ACTN1P12814 892 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 ICAM3P32942 547 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 RBL2Q08999 1139 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 NEDD9Q14511 834 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 E2F4Q16254 413 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 HYIQ5T013 277 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 ZNF746Q6NUN9 644 aaPredicted RBP12.67□□□□□ -0.38
PTPN18-212ENST00000483617 TRIML1Q8N9V2 468 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 LARP4BQ92615 738 aaKnown RBP12.67□□□□□ -0.38
PTPN18-212ENST00000483617 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
PTPN18-212ENST00000483617 ANP32BQ92688 251 aaKnown RBP12.67□□□□□ -0.38
PTPN18-212ENST00000483617 GJA10Q969M2 543 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 CCDC43Q96MW1 224 aaKnown RBP12.67□□□□□ -0.38
PTPN18-212ENST00000483617 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 EIF2AK1Q9BQI3 630 aaKnown RBP12.67□□□□□ -0.38
PTPN18-212ENST00000483617 YBX2Q9Y2T7 364 aaKnown RBP12.67□□□□□ -0.38
PTPN18-212ENST00000483617 GBF1Q92538 1859 aa12.67□□□□□ -0.38
PTPN18-212ENST00000483617 A0A087X0B3 334 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 SPATA31C2B4DYI2 1134 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 DDX39AO00148 427 aaKnown RBP12.66□□□□□ -0.38
PTPN18-212ENST00000483617 DLL1O00548 723 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 NOP56O00567 594 aaKnown RBP12.66□□□□□ -0.38
PTPN18-212ENST00000483617 SSBP05455 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTPN18-212ENST00000483617 P4HBP07237 508 aaKnown RBP12.66□□□□□ -0.38
PTPN18-212ENST00000483617 SELPP16109 830 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 ATP2A2P16615 1042 aaKnown RBP12.66□□□□□ -0.38
PTPN18-212ENST00000483617 RABGGTBP53611 331 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 SPIRE1Q08AE8 756 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 GRB10Q13322 594 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 PNOCQ13519 176 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 PDXDC2PQ6P474 469 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 METTL7BQ6UX53 244 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 LRRC8DQ7L1W4 858 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 TPH2Q8IWU9 490 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
PTPN18-212ENST00000483617 RAD54LQ92698 747 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 GSDMAQ96QA5 445 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 NACC1Q96RE7 527 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 MMTAG2Q9BU76 263 aaKnown RBP12.66□□□□□ -0.38
PTPN18-212ENST00000483617 NKX2-4Q9H2Z4 354 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 UNC45AQ9H3U1 944 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 JPH1Q9HDC5 661 aaPredicted RBP12.66□□□□□ -0.38
PTPN18-212ENST00000483617 SLC9A2Q9UBY0 812 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 KIAA1024Q9UPX6 916 aa12.66□□□□□ -0.38
PTPN18-212ENST00000483617 LOXHD1Q8IVV2 1947 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 LGALS2P05162 132 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 KRT18P05783 430 aaKnown RBP12.65□□□□□ -0.38
PTPN18-212ENST00000483617 PSAPP07602 524 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 NLRP12P59046 1061 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 PTK7Q13308 1070 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 DHX8Q14562 1220 aaKnown RBP12.65□□□□□ -0.38
PTPN18-212ENST00000483617 TMEM119Q4V9L6 283 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 SLC9A7Q96T83 725 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 GAS2L1Q99501 681 aaPredicted RBP12.65□□□□□ -0.38
PTPN18-212ENST00000483617 C16orf70Q9BSU1 422 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 ZSWIM4Q9H7M6 989 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 SLC28A3Q9HAS3 691 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 KBTBD4Q9NVX7 518 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 PCDHA5Q9Y5H7 936 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 PCDHA11Q9Y5I1 949 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 A0A0C4DFX4 3053 aa12.65□□□□□ -0.38
PTPN18-212ENST00000483617 CHD9Q3L8U1 2897 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 POTEB3A0JP26 581 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 H3BRB1 525 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 DHX15O43143 795 aaKnown RBP12.64□□□□□ -0.39
PTPN18-212ENST00000483617 BAIAP3O94812 1187 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
PTPN18-212ENST00000483617 CKBP12277 381 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 QARSP47897 775 aaKnown RBP12.64□□□□□ -0.39
PTPN18-212ENST00000483617 MRE11P49959 708 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 TPM4P67936 248 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 ASIC1P78348 528 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 CYP4A11Q02928 519 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 ITGB3BPQ13352 177 aaPredicted RBP12.64□□□□□ -0.39
PTPN18-212ENST00000483617 STIM1Q13586 685 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
PTPN18-212ENST00000483617 PPP2R2DQ66LE6 453 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 MIS18BP1Q6P0N0 1132 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 POTEBQ6S5H4 581 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 CYFIP1Q7L576 1253 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 CATSPER3Q86XQ3 398 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 ATP6V0A1Q93050 837 aa12.64□□□□□ -0.39
PTPN18-212ENST00000483617 DYDC2Q96IM9 177 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms