RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 ADAMTS19Q8TE59 1207 aa16.94■□□□□ 0.3
PRKN-207ENST00000479615 P2RX5Q93086 422 aa16.94■□□□□ 0.3
PRKN-207ENST00000479615 ST3GAL5Q9UNP4 418 aa16.94■□□□□ 0.3
PRKN-207ENST00000479615 AKT3Q9Y243 479 aa16.94■□□□□ 0.3
PRKN-207ENST00000479615 NOC2LQ9Y3T9 749 aaKnown RBP16.94■□□□□ 0.3
PRKN-207ENST00000479615 PCDHB7Q9Y5E2 793 aa16.94■□□□□ 0.3
PRKN-207ENST00000479615 TNFRSF10AO00220 468 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 MARCH6O60337 910 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 CCNT1O60563 726 aaKnown RBP16.93■□□□□ 0.3
PRKN-207ENST00000479615 CTDNEP1O95476 244 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 BMP1P13497 986 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 EIF4BP23588 611 aaKnown RBP16.93■□□□□ 0.3
PRKN-207ENST00000479615 CTNNB1P35222 781 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 KRT2P35908 639 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 TARBP2Q15633 366 aaKnown RBP16.93■□□□□ 0.3
PRKN-207ENST00000479615 ME3Q16798 604 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 KIZQ2M2Z5 673 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 TRMT1LQ7Z2T5 733 aaKnown RBP16.93■□□□□ 0.3
PRKN-207ENST00000479615 LINC01465Q8N7H1 131 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 LINC01599Q8WXQ3 324 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 TMX1Q9H3N1 280 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 ELAC1Q9H777 363 aaKnown RBP16.93■□□□□ 0.3
PRKN-207ENST00000479615 KCNMB3Q9NPA1 279 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 TRANK1O15050 2925 aa16.93■□□□□ 0.3
PRKN-207ENST00000479615 HOXA2O43364 376 aa16.92■□□□□ 0.3
PRKN-207ENST00000479615 ZSCAN20P17040 1043 aaPredicted RBP16.92■□□□□ 0.3
PRKN-207ENST00000479615 QARSP47897 775 aaKnown RBP16.92■□□□□ 0.3
PRKN-207ENST00000479615 NLRP11P59045 1033 aaKnown RBP16.92■□□□□ 0.3
PRKN-207ENST00000479615 PUS10Q3MIT2 529 aaKnown RBP16.92■□□□□ 0.3
PRKN-207ENST00000479615 PIK3AP1Q6ZUJ8 805 aa16.92■□□□□ 0.3
PRKN-207ENST00000479615 BANK1Q8NDB2 785 aa16.92■□□□□ 0.3
PRKN-207ENST00000479615 RSPH1Q8WYR4 309 aa16.92■□□□□ 0.3
PRKN-207ENST00000479615 UHRF1Q96T88 793 aaPredicted RBP16.92■□□□□ 0.3
PRKN-207ENST00000479615 OSMRQ99650 979 aa16.92■□□□□ 0.3
PRKN-207ENST00000479615 ADAM2Q99965 735 aa16.92■□□□□ 0.3
PRKN-207ENST00000479615 INO80BQ9C086 356 aaPredicted RBP16.92■□□□□ 0.3
PRKN-207ENST00000479615 NSUN3Q9H649 340 aaKnown RBP16.92■□□□□ 0.3
PRKN-207ENST00000479615 CDHR5Q9HBB8 845 aa16.92■□□□□ 0.3
PRKN-207ENST00000479615 TTC3P53804 2025 aa16.92■□□□□ 0.3
PRKN-207ENST00000479615 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.91■□□□□ 0.3
PRKN-207ENST00000479615 VTNP04004 478 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 P4HBP07237 508 aaKnown RBP16.91■□□□□ 0.3
PRKN-207ENST00000479615 FDPSP14324 419 aaKnown RBP16.91■□□□□ 0.3
PRKN-207ENST00000479615 CLCN3P51790 818 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 FAM189BP81408 668 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 CSPP1Q1MSJ5 1256 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 TMEM266Q2M3C6 531 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 TMEM40Q8WWA1 233 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 PPP2R3CQ969Q6 453 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 ADAMTS10Q9H324 1103 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 AAASQ9NRG9 546 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 TMEM161AQ9NX61 479 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 SEPT9Q9UHD8 586 aaPredicted RBP16.91■□□□□ 0.3
PRKN-207ENST00000479615 LIMCH1Q9UPQ0 1083 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 TTC28Q96AY4 2481 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 SIP14410 1827 aa16.91■□□□□ 0.3
PRKN-207ENST00000479615 IGKV6-21A0A0C4DH24 114 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 C9IYK1 514 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 SLC37A4O43826 429 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 LINC00271P0C7V0 271 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 GPC3P51654 580 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 TFF2Q03403 129 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 UGCGQ16739 394 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 OTUD6AQ7L8S5 288 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 FAM228AQ86W67 206 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 NSUN7Q8NE18 718 aaKnown RBP16.9■□□□□ 0.3
PRKN-207ENST00000479615 ZSCAN31Q96LW9 406 aaPredicted RBP16.9■□□□□ 0.3
PRKN-207ENST00000479615 SCLT1Q96NL6 688 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 LLPHQ9BRT6 129 aaKnown RBP16.9■□□□□ 0.3
PRKN-207ENST00000479615 GCOM2Q9BZD3 368 aaPredicted RBP16.9■□□□□ 0.3
PRKN-207ENST00000479615 UBE2ZQ9H832 354 aaPredicted RBP16.9■□□□□ 0.3
PRKN-207ENST00000479615 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 DACT1Q9NYF0 836 aa16.9■□□□□ 0.3
PRKN-207ENST00000479615 VCANP13611 3396 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 MAFO75444 373 aaPredicted RBP16.89■□□□□ 0.29
PRKN-207ENST00000479615 MMP1P03956 469 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 DARSP14868 501 aaKnown RBP16.89■□□□□ 0.29
PRKN-207ENST00000479615 EPHA7Q15375 998 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 SAFBQ15424 915 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRKN-207ENST00000479615 LEXMQ3ZCV2 418 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 MTERF2Q49AM1 385 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 ZNF410Q86VK4 478 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 LRRC71Q8N4P6 559 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 NLRP7Q8WX94 980 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 SLC7A3Q8WY07 619 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 GJA10Q969M2 543 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 CHST12Q9NRB3 414 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 VAV3Q9UKW4 847 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
PRKN-207ENST00000479615 MYH9P35579 1960 aaKnown RBP16.89■□□□□ 0.29
PRKN-207ENST00000479615 GAS2O43903 313 aaKnown RBP16.88■□□□□ 0.29
PRKN-207ENST00000479615 STBD1O95210 358 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 UBE3AQ05086 875 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 DSC3Q14574 896 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 COL19A1Q14993 1142 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 HAS1Q92839 578 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms