RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 SPATA33Q96N06 139 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 INPP4AQ96PE3 977 aaPredicted RBP8.37□□□□□ -1.07
SSR1-206ENST00000479365 C16orf70Q9BSU1 422 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 PRDM12Q9H4Q4 367 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 RTEL1Q9NZ71 1219 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 GTF2IRD1Q9UHL9 959 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 BRPF3Q9ULD4 1205 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 SCN5AQ14524 2016 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 TANC1Q9C0D5 1861 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 SPATA31C2B4DYI2 1134 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 PPFIA4O75335 1185 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 CDC45O75419 566 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 PFKMP08237 780 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 ICAM3P32942 547 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 KIF5BP33176 963 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 RFC2P35250 354 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 RBL2Q08999 1139 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 TRAF1Q13077 416 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 BFSP2Q13515 415 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 RAB30Q15771 203 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 UBE2SQ16763 222 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 KCNV1Q6PIU1 500 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 MICU3Q86XE3 530 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 TMTC2Q8N394 836 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 C7orf31Q8N865 590 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 FANCBQ8NB91 859 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 SMARCC2Q8TAQ2 1214 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 AFAP1L1Q8TED9 768 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 NEK1Q96PY6 1258 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 LZTS2Q9BRK4 669 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 MTIF3Q9H2K0 278 aaKnown RBP8.36□□□□□ -1.07
SSR1-206ENST00000479365 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 SLC4A7Q9Y6M7 1214 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 CHD7Q9P2D1 2997 aa8.36□□□□□ -1.07
SSR1-206ENST00000479365 CNTNAP5Q8WYK1 1306 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 PRUNE2Q8WUY3 3088 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 FIGNL2A6NMB9 653 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 TMEM229AB2RXF0 380 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 TREHO43280 583 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 NBNO60934 754 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 FAM13AO94988 1023 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 LGALS2P05162 132 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 CALM1P0DP23 149 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 CALM2P0DP24 149 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 CALM3P0DP25 149 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 TGFB3P10600 412 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 CKBP12277 381 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 CPA1P15085 419 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 SELPP16109 830 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 ATP2A2P16615 1042 aaKnown RBP8.35□□□□□ -1.07
SSR1-206ENST00000479365 ITGB5P18084 799 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 HOXC8P31273 242 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 GNAQP50148 359 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 GDF10P55107 478 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 RAD51AP2Q09MP3 1159 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 CLN3Q13286 438 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 PCNX4Q63HM2 1172 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 APOA5Q6Q788 366 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 LRRC8DQ7L1W4 858 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 CYFIP1Q7L576 1253 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 TMCO2Q7Z6W1 182 aaPredicted RBP8.35□□□□□ -1.07
SSR1-206ENST00000479365 CAGE1Q8TC20 777 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 GPR20Q99678 358 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 COL25A1Q9BXS0 654 aaPredicted RBP8.35□□□□□ -1.07
SSR1-206ENST00000479365 FTOQ9C0B1 505 aaKnown RBP eCLIP8.35□□□□□ -1.076e-16■□□□□ 10.2
SSR1-206ENST00000479365 MLXIPQ9HAP2 919 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 PRDM6Q9NQX0 595 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 SEC63Q9UGP8 760 aaKnown RBP8.35□□□□□ -1.07
SSR1-206ENST00000479365 MSRAQ9UJ68 235 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
SSR1-206ENST00000479365 GBF1Q92538 1859 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 TTLL8A6PVC2 850 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 FIBPO43427 364 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 ATP9AO75110 1047 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 STAM2O75886 525 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 CXCL10P02778 98 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 CA3P07451 260 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 SMIM10L2AP0DMW4 78 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 SMIM10L2BP0DMW5 78 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 IGFBP4P22692 258 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 GNPTABQ3T906 1256 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 ZNF618Q5T7W0 954 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 WWC2Q6AWC2 1192 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 METTL7BQ6UX53 244 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 DHX32Q7L7V1 743 aaKnown RBP8.34□□□□□ -1.07
SSR1-206ENST00000479365 HEATR3Q7Z4Q2 680 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 SPRED2Q7Z698 418 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 SERINC5Q86VE9 423 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.34□□□□□ -1.07
SSR1-206ENST00000479365 PIK3R5Q8WYR1 880 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 KCNB2Q92953 911 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 KATNAL1Q9BW62 490 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 OSBPL7Q9BZF2 842 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 PSTPIP2Q9H939 334 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 SLC28A3Q9HAS3 691 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 SERTAD1Q9UHV2 236 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 DNMT3LQ9UJW3 386 aa8.34□□□□□ -1.07
SSR1-206ENST00000479365 C17orf102A2RUQ5 167 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms