RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 PKN3Q6P5Z2 889 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 FILIP1Q7Z7B0 1213 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 TTLL11Q8NHH1 800 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 CHAC2Q8WUX2 184 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 CPA5Q8WXQ8 436 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 TOE1Q96GM8 510 aaKnown RBP7.01□□□□□ -1.29
CCDC171-207ENST00000478913 ORAI2Q96SN7 254 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 SPC25Q9HBM1 224 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 ZKSCAN5Q9Y2L8 839 aa7.01□□□□□ -1.29
CCDC171-207ENST00000478913 PTPDC1A2A3K4 754 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 TRAF5O00463 557 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 NFIBO00712 420 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 BUB1BO60566 1050 aaPredicted RBP7□□□□□ -1.29
CCDC171-207ENST00000478913 DNAJC6O75061 913 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 HIP1RO75146 1068 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 KRT37O76014 449 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 GJA4P35212 333 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 STAT3P40763 770 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 STAT5AP42229 794 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 CACNB2Q08289 660 aaPredicted RBP7□□□□□ -1.29
CCDC171-207ENST00000478913 CT47A1Q5JQC4 288 aaPredicted RBP7□□□□□ -1.29
CCDC171-207ENST00000478913 ZNF648Q5T619 568 aaPredicted RBP7□□□□□ -1.29
CCDC171-207ENST00000478913 BTBD8Q5XKL5 378 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 CD300LDQ6UXZ3 194 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 RNF180Q86T96 592 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 NOSTRINQ8IVI9 506 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 IGDCC3Q8IVU1 814 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 LEO1Q8WVC0 666 aaPredicted RBP7□□□□□ -1.29
CCDC171-207ENST00000478913 ORAI3Q9BRQ5 295 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 BOCQ9BWV1 1114 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 CAAP1Q9H8G2 361 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 NGRNQ9NPE2 291 aaKnown RBP7□□□□□ -1.29
CCDC171-207ENST00000478913 RIC8BQ9NVN3 520 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 B4GALT6Q9UBX8 382 aa7□□□□□ -1.29
CCDC171-207ENST00000478913 TCAF2A6NFQ2 919 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 SCDO00767 359 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 GAS7O60861 476 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 CLASP2O75122 1294 aaKnown RBP6.99□□□□□ -1.29
CCDC171-207ENST00000478913 CYP2C8P10632 490 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 PTPN1P18031 435 aaKnown RBP6.99□□□□□ -1.29
CCDC171-207ENST00000478913 CNGA1P29973 690 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 NKX3-2P78367 333 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 IRF9Q00978 393 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 SART3Q15020 963 aaKnown RBP6.99□□□□□ -1.29
CCDC171-207ENST00000478913 PAN2Q504Q3 1202 aaKnown RBP6.99□□□□□ -1.29
CCDC171-207ENST00000478913 CPZQ66K79 652 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 OTOP1Q7RTM1 612 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 KIF18BQ86Y91 864 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 POU5F2Q8N7G0 328 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.99□□□□□ -1.29
CCDC171-207ENST00000478913 IRAK3Q9Y616 596 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 TET3O43151 1660 aa6.99□□□□□ -1.29
CCDC171-207ENST00000478913 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.98□□□□□ -1.29
CCDC171-207ENST00000478913 TMEM131LA2VDJ0 1609 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 ANKRD62A6NC57 917 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 FAM90A27PA6NNH2 459 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 H7C1D1 291 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 C8BP07358 591 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 MED14OSP0DP75 135 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 ATF2P15336 505 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 FAHP16930 419 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 SEPT7Q16181 437 aaKnown RBP6.98□□□□□ -1.29
CCDC171-207ENST00000478913 PKN1Q16512 942 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
CCDC171-207ENST00000478913 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 TEPPQ6URK8 271 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 ATG14Q6ZNE5 492 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 KRT26Q7Z3Y9 468 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 FAM26EQ8N5C1 309 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 UBR7Q8N806 425 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 OR2W6PQ8NHA6 318 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 SMARCC2Q8TAQ2 1214 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 SIGLEC10Q96LC7 697 aa6.98□□□□□ -1.29
CCDC171-207ENST00000478913 PRAMEF25A6NGN4 478 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 ZNF891A8MT65 544 aaPredicted RBP6.97□□□□□ -1.29
CCDC171-207ENST00000478913 F2P00734 622 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 LRG1P02750 347 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 VIL1P09327 827 aaKnown RBP6.97□□□□□ -1.29
CCDC171-207ENST00000478913 IGFBP6P24592 240 aaPredicted RBP6.97□□□□□ -1.29
CCDC171-207ENST00000478913 LIMS1P48059 325 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 SCNN1BP51168 640 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 CR1LQ2VPA4 569 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 FSTL4Q6MZW2 842 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 DDX46Q7L014 1031 aaKnown RBP6.97□□□□□ -1.29
CCDC171-207ENST00000478913 B3GNT8Q7Z7M8 397 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 NXPE1Q8N323 547 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 BHLHE22Q8NFJ8 381 aaPredicted RBP6.97□□□□□ -1.29
CCDC171-207ENST00000478913 KCNH7Q9NS40 1196 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 IFT57Q9NWB7 429 aa6.97□□□□□ -1.29
CCDC171-207ENST00000478913 GPATCH8Q9UKJ3 1502 aaKnown RBP6.96□□□□□ -1.29
CCDC171-207ENST00000478913 COL6A3P12111 3177 aa6.96□□□□□ -1.29
CCDC171-207ENST00000478913 ADGRL3Q9HAR2 1447 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 ACOT7O00154 380 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 TSPAN15O95858 294 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 C1QTNF9P0C862 333 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 FOXO4P98177 505 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 DSG1Q02413 1049 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 ZNF174Q15697 407 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 PCIF1Q9H4Z3 704 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms