RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 NPTXRO95502 500 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 AMY2AP04746 511 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 KRT15P19012 456 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 AMY2BP19961 511 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 POU3F2P20265 443 aaPredicted RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 CANXP27824 592 aaKnown RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 FLT3P36888 993 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 EPHA5P54756 1037 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 JAM2P57087 298 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 LACTBP83111 547 aaPredicted RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 DPTQ07507 201 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 TOP3AQ13472 1001 aaPredicted RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 PCBP1Q15365 356 aaKnown RBP eCLIP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 GPR19Q15760 415 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 CRY1Q16526 586 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 TMEM177Q53S58 311 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 CDCA2Q69YH5 1023 aaPredicted RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 DPP8Q6V1X1 898 aaPredicted RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 ARHGAP36Q6ZRI8 547 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 UBE2R2Q712K3 238 aaPredicted RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 DDX53Q86TM3 631 aaKnown RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 PTRH1Q86Y79 214 aaKnown RBP3.68□□□□□ -1.82
CACUL1-202ENST00000477583 SH3RF2Q8TEC5 729 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 CEP89Q96ST8 783 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 DPYSL5Q9BPU6 564 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 CD244Q9BZW8 370 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 SMURF1Q9HCE7 757 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 SLC39A2Q9NP94 309 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 NR2E1Q9Y466 385 aa3.68□□□□□ -1.82
CACUL1-202ENST00000477583 ACOT7O00154 380 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 TRAF5O00463 557 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 MAN2B1O00754 1011 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 C1SP09871 688 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 ETV4P43268 484 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 MECP2P51608 486 aaKnown RBP3.67□□□□□ -1.82
CACUL1-202ENST00000477583 DBPQ10586 325 aaPredicted RBP3.67□□□□□ -1.82
CACUL1-202ENST00000477583 FSTL4Q6MZW2 842 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 Q6ZSN1 163 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 FILIP1Q7Z7B0 1213 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 AHI1Q8N157 1196 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 PPM1KQ8N3J5 372 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 NEU4Q8WWR8 484 aaPredicted RBP3.67□□□□□ -1.82
CACUL1-202ENST00000477583 WNK4Q96J92 1243 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 SCYL1Q96KG9 808 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 PLEKHG4BQ96PX9 1271 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 PLA2G12BQ9BX93 195 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 IKZF4Q9H2S9 585 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 C12orf65Q9H3J6 166 aaKnown RBP3.67□□□□□ -1.82
CACUL1-202ENST00000477583 IFT57Q9NWB7 429 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 SRPK3Q9UPE1 567 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 MAPRE3Q9UPY8 281 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 PRKAB1Q9Y478 270 aa3.67□□□□□ -1.82
CACUL1-202ENST00000477583 ANKRD62A6NC57 917 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 CBX4O00257 560 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 DNAJC6O75061 913 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 VIL1P09327 827 aaKnown RBP3.66□□□□□ -1.82
CACUL1-202ENST00000477583 ACRV1P26436 265 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 RPS19P39019 145 aaKnown RBP3.66□□□□□ -1.82
CACUL1-202ENST00000477583 STAT3P40763 770 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 INHBCP55103 352 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 NOLC1Q14978 699 aaKnown RBP eCLIP3.66□□□□□ -1.82
CACUL1-202ENST00000477583 SEPT7Q16181 437 aaKnown RBP3.66□□□□□ -1.82
CACUL1-202ENST00000477583 WDR72Q3MJ13 1102 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 RNF187Q5TA31 235 aaPredicted RBP3.66□□□□□ -1.82
CACUL1-202ENST00000477583 MAMDC4Q6UXC1 1216 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 RNF180Q86T96 592 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 ZNF808Q8N4W9 903 aaPredicted RBP3.66□□□□□ -1.82
CACUL1-202ENST00000477583 UBR7Q8N806 425 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 C2orf69Q8N8R5 385 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 CHST14Q8NCH0 376 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 IL17DQ8TAD2 202 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 CACTINQ8WUQ7 758 aaKnown RBP3.66□□□□□ -1.82
CACUL1-202ENST00000477583 LEO1Q8WVC0 666 aaPredicted RBP3.66□□□□□ -1.82
CACUL1-202ENST00000477583 ORAI3Q9BRQ5 295 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 SPC25Q9HBM1 224 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 ARHGAP28Q9P2N2 729 aa3.66□□□□□ -1.82
CACUL1-202ENST00000477583 A0A087X1B8 175 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 PTPDC1A2A3K4 754 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 FAM90A27PA6NNH2 459 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 ZNF891A8MT65 544 aaPredicted RBP3.65□□□□□ -1.83
CACUL1-202ENST00000477583 MATN2O00339 956 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 PLSCR1O15162 318 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 ARHGAP6O43182 974 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 HMGCRP04035 888 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 ADH4P08319 380 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 DUSP8Q13202 625 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 TUBA3CQ13748 450 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 SEC23AQ15436 765 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 FIGNQ5HY92 759 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 BTBD8Q5XKL5 378 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 TUBA3EQ6PEY2 450 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 EP400NLQ6ZTU2 488 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 OTOP1Q7RTM1 612 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 KRT26Q7Z3Y9 468 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 NOSTRINQ8IVI9 506 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 NLGN4XQ8N0W4 816 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 NXPE1Q8N323 547 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 CHAC2Q8WUX2 184 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 KIAA1683Q9H0B3 1180 aa3.65□□□□□ -1.83
CACUL1-202ENST00000477583 CAAP1Q9H8G2 361 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms