RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 WDR75Q8IWA0 830 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 DTX3Q8N9I9 347 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 FERMT2Q96AC1 680 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 EAF2Q96CJ1 260 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 DENND2AQ9ULE3 1009 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 INVSQ9Y283 1065 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 PPP2R3BQ9Y5P8 575 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 GPR45Q9Y5Y3 372 aa5.76□□□□□ -1.49
CDC42BPA-211ENST00000466538 MYPNQ86TC9 1320 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 XPOTO43592 962 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 APOL3O95236 402 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 CHGBP05060 677 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 C8BP07358 591 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 AGXTP21549 392 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 MC4RP32245 332 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 CYP2C19P33261 490 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 GPR15P49685 360 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 SLC5A3P53794 718 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 NFATC3Q12968 1075 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 GTF2H3Q13889 308 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 MYBPC3Q14896 1274 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 ODF1Q14990 250 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 STILQ15468 1287 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 SKIDA1Q1XH10 827 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 ANO4Q32M45 955 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 CCDC178Q5BJE1 867 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 PITRM1Q5JRX3 1037 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 PRAMEF9Q5VWM5 478 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 TMEM132EQ6IEE7 984 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 LIPIQ6XZB0 460 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 CMTR2Q8IYT2 770 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 FAM26EQ8N5C1 309 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 TGFBRAP1Q8WUH2 860 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 LIN37Q96GY3 246 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 WRNIP1Q96S55 665 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 EPB41L4BQ9H329 900 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 CNTD2Q9H8S5 307 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 DCP1AQ9NPI6 582 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 ARHGAP20Q9P2F6 1191 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 TMPRSS11EQ9UL52 423 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 PCDHA5Q9Y5H7 936 aa5.75□□□□□ -1.49
CDC42BPA-211ENST00000466538 SEMA7AO75326 666 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 CYP7B1O75881 506 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 PFKMP08237 780 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 ATF2P15336 505 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 AKAP5P24588 427 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 RGS3P49796 1198 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 MLC1Q15049 377 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 ACAP2Q15057 778 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 ZBTB41Q5SVQ8 909 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 CCDC62Q6P9F0 684 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 MAGEB6Q8N7X4 407 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 TTLL6Q8N841 843 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 TTC8Q8TAM2 541 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 MZB1Q8WU39 189 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 AUTS2Q8WXX7 1259 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 JADE3Q92613 823 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 HSPBAP1Q96EW2 488 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 OR10A5Q9H207 317 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 KCMF1Q9P0J7 381 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 MBD1Q9UIS9 605 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 WASF3Q9UPY6 502 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 CARMIL2Q6F5E8 1435 aa5.74□□□□□ -1.49
CDC42BPA-211ENST00000466538 A0A0A6YYJ9 748 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 MYOCOSA0A1B0GUC4 107 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 N4BP3O15049 544 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 PRC1O43663 620 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 CUTAO60888 179 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 CLEC2LP0C7M8 214 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 PF4V1P10720 104 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 IGFBP6P24592 240 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 IRAK1P51617 712 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 MAP3K12Q12852 859 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 NOLC1Q14978 699 aaKnown RBP eCLIP5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 MUM1Q2TAK8 710 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 GFOD2Q3B7J2 385 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 TOR2AQ5JU69 321 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 UNQ6494/PRO21346Q6UXR6 183 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 TMC5Q6UXY8 1006 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 LINC00482Q8N8I6 264 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 KYQ8NBH2 561 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 OR14C36Q8NHC7 312 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 SMARCC2Q8TAQ2 1214 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 PAWRQ96IZ0 340 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 TEKT5Q96M29 485 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 AIFM3Q96NN9 605 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 CLIC6Q96NY7 704 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 PITHD1Q9GZP4 211 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 NSUN3Q9H649 340 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 PRSS50Q9UI38 385 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 SYNPO2Q9UMS6 1093 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
CDC42BPA-211ENST00000466538 CAND2O75155 1236 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 IL33O95760 270 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 IL18BPO95998 194 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 THBS2P35442 1172 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 CDR1P51861 262 aa5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 ADKP55263 362 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-211ENST00000466538 ITGA1P56199 1179 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms