RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 HAUS3Q68CZ6 603 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 NCAPH2Q6IBW4 605 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 SWSAP1Q6NVH7 229 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 FAM173BQ6P4H8 233 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 ABHD15Q6UXT9 468 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 ANKRD33Q7Z3H0 272 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 TRIM50Q86XT4 487 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 ENOX1Q8TC92 643 aaKnown RBP11.1□□□□□ -0.63
PMF1-204ENST00000466489 AFAP1L1Q8TED9 768 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 UBXN4Q92575 508 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 HAS1Q92839 578 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 IQCDQ96DY2 449 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 CCDC43Q96MW1 224 aaKnown RBP11.1□□□□□ -0.63
PMF1-204ENST00000466489 BCAS3Q9H6U6 928 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 PRDM5Q9NQX1 630 aaPredicted RBP11.1□□□□□ -0.63
PMF1-204ENST00000466489 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 PCDHB6Q9Y5E3 794 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 TRIP12Q14669 1992 aaPredicted RBP11.1□□□□□ -0.63
PMF1-204ENST00000466489 NRCAMQ92823 1304 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 C17orf102A2RUQ5 167 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 EFCAB8A8MWE9 144 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 HAS3O00219 553 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 HBP1O60381 514 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 P4HBP07237 508 aaKnown RBP11.09□□□□□ -0.63
PMF1-204ENST00000466489 CLTBP09497 229 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 CDK11BP21127 795 aaKnown RBP11.09□□□□□ -0.63
PMF1-204ENST00000466489 QARSP47897 775 aaKnown RBP11.09□□□□□ -0.63
PMF1-204ENST00000466489 TOB1P50616 345 aaPredicted RBP11.09□□□□□ -0.63
PMF1-204ENST00000466489 PSMC5P62195 406 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 TLE2Q04725 743 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 TRIM14Q14142 442 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 EPHA7Q15375 998 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 PTGISQ16647 500 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 AXDND1Q5T1B0 1012 aaPredicted RBP11.09□□□□□ -0.63
PMF1-204ENST00000466489 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 C7orf61Q8IZ16 206 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 AOPEPQ8N6M6 819 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 SLC43A3Q8NBI5 491 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 MNS1Q8NEH6 495 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 ATP8B4Q8TF62 1192 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 BBXQ8WY36 941 aaPredicted RBP11.09□□□□□ -0.63
PMF1-204ENST00000466489 KAT2BQ92831 832 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 SMARCE1Q969G3 411 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 PKNOX2Q96KN3 472 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 NRBP2Q9NSY0 501 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 TMEM39AQ9NV64 488 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 MYO1AQ9UBC5 1043 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 GTF2IRD1Q9UHL9 959 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 VAV3Q9UKW4 847 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 IGSF9BQ9UPX0 1349 aa11.09□□□□□ -0.63
PMF1-204ENST00000466489 COL1A2P08123 1366 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 IGKV6D-21A0A0A0MT36 114 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 AP5Z1O43299 807 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 PFKFB1P16118 471 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 TECP42680 631 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 CDK7P50613 346 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
PMF1-204ENST00000466489 ATP2C1P98194 919 aaPredicted RBP11.08□□□□□ -0.64
PMF1-204ENST00000466489 FANCCQ00597 558 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 BFSP2Q13515 415 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 ZNF484Q5JVG2 852 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 SPECC1LQ69YQ0 1117 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 OTUD6AQ7L8S5 288 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 RSPH3Q86UC2 560 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 CCDC60Q8IWA6 550 aaPredicted RBP11.08□□□□□ -0.64
PMF1-204ENST00000466489 FAM126BQ8IXS8 530 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 EXOC8Q8IYI6 725 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 GJA10Q969M2 543 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 GSDMAQ96QA5 445 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 LBHD1Q9BQE6 289 aaPredicted RBP11.08□□□□□ -0.64
PMF1-204ENST00000466489 TMEM60Q9H2L4 133 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 ZSWIM4Q9H7M6 989 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 HDAC6Q9UBN7 1215 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 LRWD1Q9UFC0 647 aa11.08□□□□□ -0.64
PMF1-204ENST00000466489 MAFBQ9Y5Q3 323 aaPredicted RBP11.08□□□□□ -0.64
PMF1-204ENST00000466489 A0A1B0GVL5 298 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 WNT7AO00755 349 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 OATP04181 439 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 RAG1P15918 1043 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 TXLNAP40222 546 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 PRKCEQ02156 737 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 PDIA5Q14554 519 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 GRIK4Q16099 956 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 XKR3Q5GH77 459 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 KRT79Q5XKE5 535 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 TAF2Q6P1X5 1199 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 B3GNT9Q6UX72 402 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 KRBA2Q6ZNG9 492 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 RETREG2Q8NC44 543 aa11.07□□□□□ -0.64
PMF1-204ENST00000466489 BANK1Q8NDB2 785 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms