RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 PLCB4Q15147 1175 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 SLC35G1Q2M3R5 365 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 GPR149Q86SP6 731 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 SLC39A11Q8N1S5 342 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 ENAHQ8N8S7 591 aaPredicted RBP17.37■□□□□ 0.37
NCSTN-210ENST00000465223 FAM227BQ96M60 508 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 PCYT2Q99447 389 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 HELLSQ9NRZ9 838 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 PKD2L1Q9P0L9 805 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 IGSF9Q9P2J2 1179 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 ST3GAL5Q9UNP4 418 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 SIT1Q9Y3P8 196 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 ATRXP46100 2492 aa17.37■□□□□ 0.37
NCSTN-210ENST00000465223 CHD8Q9HCK8 2581 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 A0A0D9SFI3 127 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.36■□□□□ 0.37
NCSTN-210ENST00000465223 KLRF2D3W0D1 207 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 N4BP1O75113 896 aaKnown RBP17.36■□□□□ 0.37
NCSTN-210ENST00000465223 MS4A1P11836 297 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 FAM189BP81408 668 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 LMNB2Q03252 620 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 CABP7Q86V35 215 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 IQCA1Q86XH1 822 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 GPR161Q8N6U8 529 aaKnown RBP17.36■□□□□ 0.37
NCSTN-210ENST00000465223 PIGSQ96S52 555 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 ZSCAN10Q96SZ4 725 aaPredicted RBP17.36■□□□□ 0.37
NCSTN-210ENST00000465223 DCTPP1Q9H773 170 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 USP18Q9UMW8 372 aa17.36■□□□□ 0.37
NCSTN-210ENST00000465223 SMIM35A0A1B0GVV1 85 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 METAP2P50579 478 aaKnown RBP eCLIP17.35■□□□□ 0.37
NCSTN-210ENST00000465223 PPM1JQ5JR12 505 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 ZNF589Q86UQ0 364 aaPredicted RBP17.35■□□□□ 0.37
NCSTN-210ENST00000465223 NLRX1Q86UT6 975 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 LRRC43Q8N309 656 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 TMEM87AQ8NBN3 555 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 GIMAP8Q8ND71 665 aaPredicted RBP17.35■□□□□ 0.37
NCSTN-210ENST00000465223 GPR152Q8TDT2 470 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 PPP1R16BQ96T49 567 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 FOXQ1Q9C009 403 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 RNF41Q9H4P4 317 aaPredicted RBP17.35■□□□□ 0.37
NCSTN-210ENST00000465223 ELAC1Q9H777 363 aaKnown RBP17.35■□□□□ 0.37
NCSTN-210ENST00000465223 ZMYM6O95789 1325 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 MIA3Q5JRA6 1907 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 EVPLQ92817 2033 aa17.35■□□□□ 0.37
NCSTN-210ENST00000465223 B4E1Z4 1266 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 TGM1P22735 817 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 ACAP1Q15027 740 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 LETM2Q2VYF4 491 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 CCDC178Q5BJE1 867 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 PCNX4Q63HM2 1172 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 PHLDB3Q6NSJ2 640 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 MTHFD1LQ6UB35 978 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 NME8Q8N427 588 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 SLC44A3Q8N4M1 653 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 ZBP1Q9H171 429 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 SFXN1Q9H9B4 322 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 MAD2L2Q9UI95 211 aa17.34■□□□□ 0.37
NCSTN-210ENST00000465223 PATJQ8NI35 1801 aa17.33■□□□□ 0.37
NCSTN-210ENST00000465223 COL4A3Q01955 1670 aa17.33■□□□□ 0.37
NCSTN-210ENST00000465223 SPDYE4A6NLX3 237 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 SRFP11831 508 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 DSC3Q14574 896 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 FAM228AQ86W67 206 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 VPS52Q8N1B4 723 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 PARD6AQ9NPB6 346 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 ARHGEF3Q9NR81 526 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 SH2B1Q9NRF2 756 aaPredicted RBP17.33■□□□□ 0.36
NCSTN-210ENST00000465223 LAMA4Q16363 1823 aa17.33■□□□□ 0.36
NCSTN-210ENST00000465223 GPR182O15218 404 aa17.32■□□□□ 0.36
NCSTN-210ENST00000465223 SPTLC1O15269 473 aa17.32■□□□□ 0.36
NCSTN-210ENST00000465223 GBP2P32456 591 aaPredicted RBP17.32■□□□□ 0.36
NCSTN-210ENST00000465223 CLLU1OSQ5K130 101 aa17.32■□□□□ 0.36
NCSTN-210ENST00000465223 USP17L6PQ6QN14 398 aa17.32■□□□□ 0.36
NCSTN-210ENST00000465223 TMEM173Q86WV6 379 aaPredicted RBP17.32■□□□□ 0.36
NCSTN-210ENST00000465223 ABI1Q8IZP0 508 aa17.32■□□□□ 0.36
NCSTN-210ENST00000465223 PJA1Q8NG27 643 aa17.32■□□□□ 0.36
NCSTN-210ENST00000465223 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
NCSTN-210ENST00000465223 PALM3A6NDB9 673 aaPredicted RBP17.31■□□□□ 0.36
NCSTN-210ENST00000465223 BCAR1P56945 870 aa17.31■□□□□ 0.36
NCSTN-210ENST00000465223 BMS1Q14692 1282 aaKnown RBP17.31■□□□□ 0.36
NCSTN-210ENST00000465223 RNF169Q8NCN4 708 aa17.31■□□□□ 0.36
NCSTN-210ENST00000465223 ST13P5Q8NFI4 369 aaPredicted RBP17.31■□□□□ 0.36
NCSTN-210ENST00000465223 SECISBP2LQ93073 1101 aaKnown RBP17.31■□□□□ 0.36
NCSTN-210ENST00000465223 GPRASP2Q96D09 838 aa17.31■□□□□ 0.36
NCSTN-210ENST00000465223 OSMRQ99650 979 aa17.31■□□□□ 0.36
NCSTN-210ENST00000465223 CHMP4BQ9H444 224 aaKnown RBP17.31■□□□□ 0.36
NCSTN-210ENST00000465223 ZSWIM5Q9P217 1185 aa17.31■□□□□ 0.36
NCSTN-210ENST00000465223 DOCK8Q8NF50 2099 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 HOXA2O43364 376 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 CYTH3O43739 400 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 CTSAP10619 480 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 ITGB5P18084 799 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 KLRC1P26715 233 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 CSTF1Q05048 431 aaKnown RBP17.3■□□□□ 0.36
NCSTN-210ENST00000465223 NONOQ15233 471 aaKnown RBP eCLIP17.3■□□□□ 0.36
NCSTN-210ENST00000465223 ZNF528Q3MIS6 628 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 ODR4Q5SWX8 454 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 DCLRE1AQ6PJP8 1040 aa17.3■□□□□ 0.36
NCSTN-210ENST00000465223 KIAA0319LQ8IZA0 1049 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms