RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 RPGRQ92834 1020 aaKnown RBP8.33□□□□□ -1.08
PTCD3-205ENST00000464541 CARD11Q9BXL7 1154 aa8.33□□□□□ -1.08
PTCD3-205ENST00000464541 Q9UFV3 132 aa8.33□□□□□ -1.08
PTCD3-205ENST00000464541 CSF2RBP32927 897 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 FAPQ12884 760 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 MOGSQ13724 837 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 SURF1Q15526 300 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 PRAMEF9Q5VWM5 478 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 ZNF662Q6ZS27 426 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 FRMD7Q6ZUT3 714 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 ESPNLQ6ZVH7 1005 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 TTLL10Q6ZVT0 673 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 RTF1Q92541 710 aaKnown RBP8.32□□□□□ -1.08
PTCD3-205ENST00000464541 TEPSINQ96N21 525 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 KCMF1Q9P0J7 381 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 MCM8Q9UJA3 840 aa8.32□□□□□ -1.08
PTCD3-205ENST00000464541 OTOL1A6NHN0 477 aaPredicted RBP8.31□□□□□ -1.08
PTCD3-205ENST00000464541 INHBBP09529 407 aa8.31□□□□□ -1.08
PTCD3-205ENST00000464541 RGS3P49796 1198 aa8.31□□□□□ -1.08
PTCD3-205ENST00000464541 USP10Q14694 798 aaKnown RBP8.31□□□□□ -1.08
PTCD3-205ENST00000464541 MYBPC3Q14896 1274 aa8.31□□□□□ -1.08
PTCD3-205ENST00000464541 BROXQ5VW32 411 aa8.31□□□□□ -1.08
PTCD3-205ENST00000464541 KIAA1841Q6NSI8 718 aa8.31□□□□□ -1.08
PTCD3-205ENST00000464541 RALYLQ86SE5 291 aaKnown RBP8.31□□□□□ -1.08
PTCD3-205ENST00000464541 RASSF3Q86WH2 238 aa8.31□□□□□ -1.08
PTCD3-205ENST00000464541 WNT8AQ9H1J5 351 aa8.31□□□□□ -1.08
PTCD3-205ENST00000464541 RTEL1Q9NZ71 1219 aa8.31□□□□□ -1.08
PTCD3-205ENST00000464541 RAB11FIP3O75154 756 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 PRPF6O94906 941 aaKnown RBP8.3□□□□□ -1.08
PTCD3-205ENST00000464541 HMGCRP04035 888 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 ADCY8P40145 1251 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 ADCY2Q08462 1091 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 STAT4Q14765 748 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 BMP8AQ7Z5Y6 402 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 KBTBD2Q8IY47 623 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 MSRAQ9UJ68 235 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 VWA7Q9Y334 891 aa8.3□□□□□ -1.08
PTCD3-205ENST00000464541 ARID1BQ8NFD5 2236 aaPredicted RBP8.3□□□□□ -1.08
PTCD3-205ENST00000464541 ADAMTS20P59510 1910 aa8.29□□□□□ -1.08
PTCD3-205ENST00000464541 POU3F3P20264 500 aaPredicted RBP8.29□□□□□ -1.08
PTCD3-205ENST00000464541 DGKDQ16760 1214 aa8.29□□□□□ -1.08
PTCD3-205ENST00000464541 ZMAT1Q5H9K5 638 aa8.29□□□□□ -1.08
PTCD3-205ENST00000464541 RNF219Q5W0B1 726 aaPredicted RBP8.29□□□□□ -1.08
PTCD3-205ENST00000464541 TRIM68Q6AZZ1 485 aa8.29□□□□□ -1.08
PTCD3-205ENST00000464541 FAM177A1Q8N128 213 aaPredicted RBP8.29□□□□□ -1.08
PTCD3-205ENST00000464541 ZCRB1Q8TBF4 217 aaKnown RBP8.29□□□□□ -1.08
PTCD3-205ENST00000464541 MYL10Q9BUA6 226 aa8.29□□□□□ -1.08
PTCD3-205ENST00000464541 PITHD1Q9GZP4 211 aaPredicted RBP8.29□□□□□ -1.08
PTCD3-205ENST00000464541 POFUT1Q9H488 388 aa8.29□□□□□ -1.08
PTCD3-205ENST00000464541 ZDHHC9Q9Y397 364 aa8.29□□□□□ -1.08
PTCD3-205ENST00000464541 NOC2LQ9Y3T9 749 aaKnown RBP8.29□□□□□ -1.08
PTCD3-205ENST00000464541 SHROOM4Q9ULL8 1493 aa8.29□□□□□ -1.08
PTCD3-205ENST00000464541 GPR39O43194 453 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 B4GALT3O60512 393 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 HOXA5P20719 270 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 ID4P47928 161 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 KCNQ1P51787 676 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 SESN2P58004 480 aaPredicted RBP8.28□□□□□ -1.08
PTCD3-205ENST00000464541 NOLC1Q14978 699 aaKnown RBP eCLIP8.28□□□□□ -1.08
PTCD3-205ENST00000464541 SPATS2Q86XZ4 545 aaKnown RBP8.28□□□□□ -1.08
PTCD3-205ENST00000464541 OR5AN1Q8NGI8 311 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 ATL2Q8NHH9 583 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 WDR66Q8TBY9 1149 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 ZNF496Q96IT1 587 aaPredicted RBP8.28□□□□□ -1.08
PTCD3-205ENST00000464541 BRINP2Q9C0B6 783 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 HAPLN2Q9GZV7 340 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 SAE1Q9UBE0 346 aaPredicted RBP8.28□□□□□ -1.08
PTCD3-205ENST00000464541 KCNG1Q9UIX4 513 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 DENND2AQ9ULE3 1009 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 SLC4A7Q9Y6M7 1214 aa8.28□□□□□ -1.08
PTCD3-205ENST00000464541 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.09
PTCD3-205ENST00000464541 KDM1AO60341 852 aa8.27□□□□□ -1.09
PTCD3-205ENST00000464541 ZNF568Q3ZCX4 644 aa8.27□□□□□ -1.09
PTCD3-205ENST00000464541 ZDHHC14Q8IZN3 488 aa8.27□□□□□ -1.09
PTCD3-205ENST00000464541 RSAD2Q8WXG1 361 aa8.27□□□□□ -1.09
PTCD3-205ENST00000464541 SYNPO2Q9UMS6 1093 aa8.27□□□□□ -1.09
PTCD3-205ENST00000464541 INVSQ9Y283 1065 aa8.27□□□□□ -1.09
PTCD3-205ENST00000464541 ATP8A1Q9Y2Q0 1164 aa8.27□□□□□ -1.09
PTCD3-205ENST00000464541 A0A0A6YYJ9 748 aa8.26□□□□□ -1.09
PTCD3-205ENST00000464541 MEOX1P50221 254 aa8.26□□□□□ -1.09
PTCD3-205ENST00000464541 HDGFL2Q7Z4V5 671 aaPredicted RBP8.26□□□□□ -1.09
PTCD3-205ENST00000464541 CXorf67Q86X51 503 aaPredicted RBP8.26□□□□□ -1.09
PTCD3-205ENST00000464541 RTKN2Q8IZC4 609 aa8.26□□□□□ -1.09
PTCD3-205ENST00000464541 BCL6BQ8N143 479 aaPredicted RBP8.26□□□□□ -1.09
PTCD3-205ENST00000464541 CLRN3Q8NCR9 226 aa8.26□□□□□ -1.09
PTCD3-205ENST00000464541 LPPQ93052 612 aa8.26□□□□□ -1.09
PTCD3-205ENST00000464541 FERMT2Q96AC1 680 aa8.26□□□□□ -1.09
PTCD3-205ENST00000464541 MSL2Q9HCI7 577 aa8.26□□□□□ -1.09
PTCD3-205ENST00000464541 ELL2O00472 640 aaPredicted RBP8.25□□□□□ -1.09
PTCD3-205ENST00000464541 APOL3O95236 402 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 CNR2P34972 360 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 UBXN11Q5T124 520 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 ERICH6BQ5W0A0 696 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 IQSEC1Q6DN90 963 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 NECAB2Q7Z6G3 386 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 DDX42Q86XP3 938 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTCD3-205ENST00000464541 KRTAP1-3Q8IUG1 177 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 GFM2Q969S9 779 aaKnown RBP8.25□□□□□ -1.09
PTCD3-205ENST00000464541 ACAP3Q96P50 834 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms