RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.9□□□□□ -0.34
VTA1-203ENST00000452973 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 ODF2LQ9ULJ1 636 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 FRMD4BQ9Y2L6 1034 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 TELO2Q9Y4R8 837 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 PPP1R12BO60237 982 aaPredicted RBP12.9□□□□□ -0.34
VTA1-203ENST00000452973 SERPING1P05155 500 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 CXCR5P32302 372 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 AMPD2Q01433 879 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 MAPK7Q13164 816 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 FAM102BQ5T8I3 360 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 NLRX1Q86UT6 975 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 NOA1Q8NC60 698 aaKnown RBP12.9□□□□□ -0.34
VTA1-203ENST00000452973 RABGGTAQ92696 567 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 GANQ9H2C0 597 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 METTL14Q9HCE5 456 aaKnown RBP12.9□□□□□ -0.34
VTA1-203ENST00000452973 LARSQ9P2J5 1176 aaKnown RBP12.9□□□□□ -0.34
VTA1-203ENST00000452973 SALL4Q9UJQ4 1053 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 DDX41Q9UJV9 622 aaKnown RBP12.9□□□□□ -0.34
VTA1-203ENST00000452973 BACH1O14867 736 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 EIF3DO15371 548 aaKnown RBP eCLIP12.89□□□□□ -0.35
VTA1-203ENST00000452973 DSG3P32926 999 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 PEX3P56589 373 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 SOX10P56693 466 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 GBP6Q6ZN66 633 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 KCTD17Q8N5Z5 321 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 HINFPQ9BQA5 517 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 GINM1Q9NU53 330 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 ZNF112Q9UJU3 913 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 ZNF214Q9UL59 606 aaPredicted RBP12.89□□□□□ -0.35
VTA1-203ENST00000452973 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
VTA1-203ENST00000452973 A0A087X0T9 212 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 TACC1O75410 805 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 FAM228BP0C875 321 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 GUCY2CP25092 1073 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 ZNF131P52739 623 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 MMS19Q96T76 1030 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 EDEM3Q9BZQ6 932 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 TSGA10Q9BZW7 698 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 SEL1LQ9UBV2 794 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 SLC16A4O15374 487 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 CCND2P30279 289 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 WHAMMP3Q1A5X7 153 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 KLHDC7AQ5VTJ3 777 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 TRAPPC11Q7Z392 1133 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 NEK9Q8TD19 979 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 OGFRQ9NZT2 677 aa12.89□□□□□ -0.35
VTA1-203ENST00000452973 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
VTA1-203ENST00000452973 WDR64B1ANS9 1081 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 NCK2O43639 380 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 MUTP22033 750 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 PTK2Q05397 1052 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 NIPA1Q7RTP0 329 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 GPC2Q8N158 579 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 PACSIN1Q9BY11 444 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 NUCKS1Q9H1E3 243 aaKnown RBP12.88□□□□□ -0.35
VTA1-203ENST00000452973 KCND2Q9NZV8 630 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 MYH10P35580 1976 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 LMNB1P20700 586 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 KIAA0753Q2KHM9 967 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 ASTE1Q2TB18 679 aaPredicted RBP12.88□□□□□ -0.35
VTA1-203ENST00000452973 SUPT20HL1Q3ZLR7 823 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 A1CFQ9NQ94 594 aaKnown RBP12.88□□□□□ -0.35
VTA1-203ENST00000452973 GABBR1Q9UBS5 961 aa12.88□□□□□ -0.35
VTA1-203ENST00000452973 SSU72P8A0A1W2PR75 194 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 C19orf81C9J6K1 198 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 ADM5C9JUS6 153 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 SLC16A3O15427 465 aaKnown RBP12.87□□□□□ -0.35
VTA1-203ENST00000452973 PSMC5P62195 406 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 PTPROQ16827 1216 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 SWSAP1Q6NVH7 229 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 VSIG10LQ86VR7 867 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 ZSWIM2Q8NEG5 633 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 TRIM58Q8NG06 486 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
VTA1-203ENST00000452973 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
VTA1-203ENST00000452973 PNKPQ96T60 521 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 ANKZF1Q9H8Y5 726 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
VTA1-203ENST00000452973 GOLGA8IPA6NC78 632 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 GOLGA8JA6NMD2 632 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
VTA1-203ENST00000452973 TUBB2AQ13885 445 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 VGLL4Q14135 290 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 TREML2Q5T2D2 321 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 CATSPERGQ6ZRH7 1159 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 HAUS6Q7Z4H7 955 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 CBWD1Q9BRT8 395 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 TUBB2BQ9BVA1 445 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 MAP3K20Q9NYL2 800 aaKnown RBP12.87□□□□□ -0.35
VTA1-203ENST00000452973 MYH11P35749 1972 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
VTA1-203ENST00000452973 GFPT2O94808 682 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms