RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 ARHGAP11AQ6P4F7 1023 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 LARP1Q6PKG0 1096 aaKnown RBP11.68□□□□□ -0.54
UBA52-202ENST00000442744 CCDC149Q6ZUS6 474 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 KDELC2Q7Z4H8 507 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 CNTROBQ8N137 903 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 TRIM58Q8NG06 486 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 MIEF2Q96C03 454 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 CORO1BQ9BR76 489 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 IFT80Q9P2H3 777 aaPredicted RBP11.68□□□□□ -0.54
UBA52-202ENST00000442744 WDR37Q9Y2I8 494 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 MSRB2Q9Y3D2 182 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 ZNF711Q9Y462 761 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 PTCH2Q9Y6C5 1203 aa11.68□□□□□ -0.54
UBA52-202ENST00000442744 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 RIPK2O43353 540 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 TSPAN1O60635 241 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 DKC1O60832 514 aaKnown RBP eCLIP11.67□□□□□ -0.54
UBA52-202ENST00000442744 NPPAP01160 153 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 IDUAP35475 653 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 ME3Q16798 604 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 WDR24Q96S15 920 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 COPRSQ9NQ92 184 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 NWD1Q149M9 1564 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 AOX1Q06278 1338 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 ELF1P32519 619 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 NLRP5P59047 1200 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 BEX3Q00994 111 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 HDAC2Q92769 488 aaKnown RBP11.67□□□□□ -0.54
UBA52-202ENST00000442744 SLC35B4Q969S0 331 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 MPHOSPH8Q99549 860 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 NAA15Q9BXJ9 866 aaKnown RBP11.67□□□□□ -0.54
UBA52-202ENST00000442744 AGO2Q9UKV8 859 aaKnown RBP11.67□□□□□ -0.54
UBA52-202ENST00000442744 GRID1Q9ULK0 1009 aa11.67□□□□□ -0.54
UBA52-202ENST00000442744 SIN3BO75182 1162 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 FAM13AO94988 1023 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 IFRD2Q12894 506 aaPredicted RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 C15orf59Q2T9L4 293 aaPredicted RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 C2orf27AQ580R0 203 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 BEND3Q5T5X7 828 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 NEK5Q6P3R8 708 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 FAM174AQ8TBP5 190 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.547e-7■■■■□ 19.8
UBA52-202ENST00000442744 FAM227BQ96M60 508 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 MFSD14AQ96MC6 490 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 SEC62Q99442 399 aaKnown RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 ACAD9Q9H845 621 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 DACT1Q9NYF0 836 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 CARD8Q9Y2G2 431 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 AXIN2Q9Y2T1 843 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 RRN3P2A6NIE6 340 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 ENO4A6NNW6 628 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 UBXN8O00124 270 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 HSPA8P11142 646 aaKnown RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 ACY1Q03154 408 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 PPIDQ08752 370 aaKnown RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 AIMP1Q12904 312 aaKnown RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 MTX1Q13505 466 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 PRKG1Q13976 671 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 NANOGNBQ7Z5D8 188 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 GRAMD2AQ8IUY3 354 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 NIM1KQ8IY84 436 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 CCAR2Q8N163 923 aaKnown RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 COL26A1Q96A83 441 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 SIL1Q9H173 461 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 WNT5BQ9H1J7 359 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 PLAAQ9Y263 795 aa11.66□□□□□ -0.54
UBA52-202ENST00000442744 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.66□□□□□ -0.54
UBA52-202ENST00000442744 GPR75-ASB3A0A0A6YYF3 556 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 PRAMEF22A3QJZ6 481 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 STMND1H3BQB6 276 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 GOSR1O95249 250 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 SERPINC1P01008 464 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 PDHA1P08559 390 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 ATP1A3P13637 1013 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
UBA52-202ENST00000442744 PLTPP55058 493 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 NKX2-3Q8TAU0 364 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 DNAJC18Q9H819 358 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 IL20Q9NYY1 176 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 GPR34Q9UPC5 381 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 SLIT1O75093 1534 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 HNRNPCL2B2RXH8 293 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 UBAP1LF5GYI3 381 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 TLR5O60602 858 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 HNRNPCL1O60812 293 aaKnown RBP11.65□□□□□ -0.54
UBA52-202ENST00000442744 CASP7P55210 303 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 CWF19L2Q2TBE0 894 aaKnown RBP11.65□□□□□ -0.54
UBA52-202ENST00000442744 ARHGAP29Q52LW3 1261 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 C4orf50Q6ZRC1 276 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 LRP10Q7Z4F1 713 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 TTC6Q86TZ1 520 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 LRRN4Q8WUT4 740 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 MFSD3Q96ES6 412 aa11.65□□□□□ -0.54
UBA52-202ENST00000442744 MTMR9Q96QG7 549 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms