RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 ATP2B1P20020 1258 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 CMA1P23946 247 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 MARCKSP29966 332 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-204ENST00000436439 CIITAP33076 1130 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 MCM7P33993 719 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 MGAT3Q09327 533 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 MTMR1Q13613 665 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 LETM2Q2VYF4 491 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 MARCH8Q5T0T0 291 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 GIMAP8Q8ND71 665 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-204ENST00000436439 FBXO22Q8NEZ5 403 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 SEPT1Q8WYJ6 367 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 PCYT2Q99447 389 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
HMGCL-204ENST00000436439 JADE2Q9NQC1 790 aa12.29□□□□□ -0.44
HMGCL-204ENST00000436439 WDR81Q562E7 1941 aa12.28□□□□□ -0.44
HMGCL-204ENST00000436439 NEMFO60524 1076 aa12.28□□□□□ -0.44
HMGCL-204ENST00000436439 CCNT1O60563 726 aaKnown RBP12.28□□□□□ -0.44
HMGCL-204ENST00000436439 GHRP10912 638 aa12.28□□□□□ -0.44
HMGCL-204ENST00000436439 GRIK4Q16099 956 aa12.28□□□□□ -0.44
HMGCL-204ENST00000436439 EPC2Q52LR7 807 aa12.28□□□□□ -0.44
HMGCL-204ENST00000436439 CYP2W1Q8TAV3 490 aa12.28□□□□□ -0.44
HMGCL-204ENST00000436439 MRPS27Q92552 414 aaKnown RBP12.28□□□□□ -0.44
HMGCL-204ENST00000436439 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMGCL-204ENST00000436439 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
HMGCL-204ENST00000436439 BRWD1Q9NSI6 2320 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.27□□□□□ -0.45
HMGCL-204ENST00000436439 MBLAC1A4D2B0 266 aaPredicted RBP12.27□□□□□ -0.45
HMGCL-204ENST00000436439 PPFIA1Q13136 1202 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 LPIN1Q14693 890 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 Q4G0T1 1027 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 RESP18Q5W5W9 173 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 RPAINQ86UA6 219 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 ENGASEQ8NFI3 743 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 DNAJB3Q8WWF6 145 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 APBB2Q92870 758 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 GLG1Q92896 1179 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 MTMR9Q96QG7 549 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 YME1L1Q96TA2 773 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 MXRA8Q9BRK3 442 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 UBE2ZQ9H832 354 aaPredicted RBP12.27□□□□□ -0.45
HMGCL-204ENST00000436439 ERAP1Q9NZ08 941 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 TUBE1Q9UJT0 475 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 HPSEQ9Y251 543 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 TTC3P53804 2025 aa12.27□□□□□ -0.45
HMGCL-204ENST00000436439 EVPLQ92817 2033 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 TBX3O15119 743 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 LETM1O95202 739 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-204ENST00000436439 OR52Z1P0C646 297 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 LINC00271P0C7V0 271 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 ARP10275 920 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 LONP1P36776 959 aaKnown RBP12.26□□□□□ -0.45
HMGCL-204ENST00000436439 IGBP1P78318 339 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 FAM160A1Q05DH4 1040 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 SHC4Q6S5L8 630 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 LRSAM1Q6UWE0 723 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 TMEM192Q8IY95 271 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-204ENST00000436439 MRPL38Q96DV4 380 aaKnown RBP12.26□□□□□ -0.45
HMGCL-204ENST00000436439 TMEM60Q9H2L4 133 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 SMARCAD1Q9H4L7 1026 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 EPHX3Q9H6B9 360 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 CD320Q9NPF0 282 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 KCNH7Q9NS40 1196 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 DDX19AQ9NUU7 478 aaKnown RBP12.26□□□□□ -0.45
HMGCL-204ENST00000436439 SLC9A2Q9UBY0 812 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 CDY2AQ9Y6F7 541 aa12.26□□□□□ -0.45
HMGCL-204ENST00000436439 H3BNC9 293 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 MAFGO15525 162 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 SLC37A4O43826 429 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 TDP2O95551 362 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 INSRRP14616 1297 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 LIG1P18858 919 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 ITGB3BPQ13352 177 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-204ENST00000436439 GPM6BQ13491 265 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 SNW1Q13573 536 aaKnown RBP12.25□□□□□ -0.45
HMGCL-204ENST00000436439 FBXO47Q5MNV8 452 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 TAF2Q6P1X5 1199 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 DTHD1Q6ZMT9 781 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 CCDC73Q6ZRK6 1079 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 NIPA1Q7RTP0 329 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 FMR1NBQ8N0W7 255 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-204ENST00000436439 FSIP1Q8NA03 581 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 TRAPPC12Q8WVT3 735 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 LINC01599Q8WXQ3 324 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 AK8Q96MA6 479 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 SAMD11Q96NU1 681 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 CLIC6Q96NY7 704 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 CSRNP2Q9H175 543 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 GOLPH3LQ9H4A5 285 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
HMGCL-204ENST00000436439 RC3H2Q9HBD1 1191 aaKnown RBP12.25□□□□□ -0.45
HMGCL-204ENST00000436439 JPH1Q9HDC5 661 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-204ENST00000436439 DDX25Q9UHL0 483 aaKnown RBP12.25□□□□□ -0.45
HMGCL-204ENST00000436439 PLXNA4Q9HCM2 1894 aa12.25□□□□□ -0.45
HMGCL-204ENST00000436439 MYH9P35579 1960 aaKnown RBP12.24□□□□□ -0.45
HMGCL-204ENST00000436439 IGLV3-22A0A075B6J6 115 aa12.24□□□□□ -0.45
HMGCL-204ENST00000436439 ENPP3O14638 875 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms