RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 C9orf50Q5SZB4 431 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 ANKEF1Q9NU02 776 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 KIAA1024Q9UPX6 916 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 PPME1Q9Y570 386 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 TRIOBPQ9H2D6 2365 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 NBNO60934 754 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 STBD1O95210 358 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 LYPLA2O95372 231 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 LONP1P36776 959 aaKnown RBP17.3■□□□□ 0.36
TREX1-201ENST00000433541 TXLNAP40222 546 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 EMC2Q15006 297 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 TARBP2Q15633 366 aaKnown RBP17.3■□□□□ 0.36
TREX1-201ENST00000433541 KIZQ2M2Z5 673 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 RPAINQ86UA6 219 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 CABP7Q86V35 215 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 KIAA0319LQ8IZA0 1049 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 ZNF579Q8NAF0 562 aaKnown RBP17.3■□□□□ 0.36
TREX1-201ENST00000433541 NLRP7Q8WX94 980 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 SEPT8Q92599 483 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 CALML4Q96GE6 196 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 ZNF668Q96K58 619 aaPredicted RBP17.3■□□□□ 0.36
TREX1-201ENST00000433541 AK8Q96MA6 479 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 PLIN2Q99541 437 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 MTRQ99707 1265 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 CELF4Q9BZC1 486 aaKnown RBP17.3■□□□□ 0.36
TREX1-201ENST00000433541 ATP6V0A4Q9HBG4 840 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 CFAP45Q9UL16 551 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 ATP6V1DQ9Y5K8 247 aa17.3■□□□□ 0.36
TREX1-201ENST00000433541 MAFO75444 373 aaPredicted RBP17.29■□□□□ 0.36
TREX1-201ENST00000433541 CHRNA1P02708 482 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
TREX1-201ENST00000433541 MUTP22033 750 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 KCNJ6P48051 423 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 NLRP11P59045 1033 aaKnown RBP17.29■□□□□ 0.36
TREX1-201ENST00000433541 PTPAQ15257 358 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 TMEM240Q5SV17 173 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 CNKSR3Q6P9H4 555 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 RHPN2Q8IUC4 686 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 TCP11Q8WWU5 503 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 IFIH1Q9BYX4 1025 aaKnown RBP17.29■□□□□ 0.36
TREX1-201ENST00000433541 NT5C3AQ9H0P0 336 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 SUCLA2Q9P2R7 463 aaPredicted RBP17.29■□□□□ 0.36
TREX1-201ENST00000433541 DNM3Q9UQ16 869 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 MICAL3Q7RTP6 2002 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 MYH11P35749 1972 aa17.29■□□□□ 0.36
TREX1-201ENST00000433541 A0A1W2PPC1 479 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 SPTLC2O15270 562 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 GAS2O43903 313 aaKnown RBP17.28■□□□□ 0.36
TREX1-201ENST00000433541 DGAT1O75907 488 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 BRD1O95696 1058 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 RARRES1P49788 294 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 DNM1Q05193 864 aaKnown RBP17.28■□□□□ 0.36
TREX1-201ENST00000433541 PAK2Q13177 524 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 IKBKEQ14164 716 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 MBTPS1Q14703 1052 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 SLC39A14Q15043 492 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 FAM26DQ5JW98 314 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 SPECC1Q5M775 1068 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 MAEAQ7L5Y9 396 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 KRI1Q8N9T8 703 aaKnown RBP17.28■□□□□ 0.36
TREX1-201ENST00000433541 PSPC1Q8WXF1 523 aaKnown RBP17.28■□□□□ 0.36
TREX1-201ENST00000433541 TMEM143Q96AN5 459 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 NLRP4Q96MN2 994 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 OSMRQ99650 979 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 CSRNP2Q9H175 543 aa17.28■□□□□ 0.36
TREX1-201ENST00000433541 YEATS4O95619 227 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 XRCC6P12956 609 aaKnown RBP eCLIP17.27■□□□□ 0.36
TREX1-201ENST00000433541 NASPP49321 788 aaPredicted RBP17.27■□□□□ 0.36
TREX1-201ENST00000433541 NUCB2P80303 420 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 GRIN1Q05586 938 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 MGAT3Q09327 533 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 NFX1Q12986 1120 aaKnown RBP17.27■□□□□ 0.36
TREX1-201ENST00000433541 FBXO47Q5MNV8 452 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 TRAF7Q6Q0C0 670 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 TSHZ1Q6ZSZ6 1077 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 C16orf59Q7L2K0 433 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 DBF4BQ8NFT6 615 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 CLIC6Q96NY7 704 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 DHX33Q9H6R0 707 aaKnown RBP17.27■□□□□ 0.36
TREX1-201ENST00000433541 FBXO2Q9UK22 296 aaPredicted RBP17.27■□□□□ 0.36
TREX1-201ENST00000433541 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
TREX1-201ENST00000433541 SRPRBQ9Y5M8 271 aaKnown RBP17.27■□□□□ 0.36
TREX1-201ENST00000433541 SLC4A7Q9Y6M7 1214 aa17.27■□□□□ 0.36
TREX1-201ENST00000433541 E9PMD0 336 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 RPS6KA5O75582 802 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 CXCL10P02778 98 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 IBSPP21815 317 aaPredicted RBP17.26■□□□□ 0.35
TREX1-201ENST00000433541 CD52P31358 61 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 ME1P48163 572 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 KRT85P78386 507 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 DRP2Q13474 957 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 LPIN1Q14693 890 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 ECM1Q16610 540 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 ODR4Q5SWX8 454 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 FAM102BQ5T8I3 360 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 ATL3Q6DD88 541 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 LINC00301Q8NCQ3 95 aa17.26■□□□□ 0.35
TREX1-201ENST00000433541 HERVK_113Q902F9 699 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms