RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 SEC31BQ9NQW1 1179 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 EXOC1LA0A1B0GW35 172 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 SPDYE16A6NNV3 312 aaPredicted RBP7.54□□□□□ -1.2
CPS1-203ENST00000430249 GSTA4O15217 222 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 NR3C1P04150 777 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 IFNA8P32881 189 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 MCAMP43121 646 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 DHX9Q08211 1270 aaKnown RBP7.54□□□□□ -1.2
CPS1-203ENST00000430249 ILF2Q12905 390 aaKnown RBP7.54□□□□□ -1.2
CPS1-203ENST00000430249 PRKG1Q13976 671 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 SPARCL1Q14515 664 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 SPDYE2Q495Y8 402 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 HEXIM2Q96MH2 286 aaKnown RBP7.54□□□□□ -1.2
CPS1-203ENST00000430249 SENP1Q9P0U3 644 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 STAP1Q9ULZ2 295 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 MOCS3O95396 460 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 TFAMQ00059 246 aaKnown RBP7.54□□□□□ -1.2
CPS1-203ENST00000430249 TMED2Q15363 201 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 EPHA7Q15375 998 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 SESTD1Q86VW0 696 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 UPF3AQ9H1J1 476 aaKnown RBP7.54□□□□□ -1.2
CPS1-203ENST00000430249 LY9Q9HBG7 655 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 PCDHB6Q9Y5E3 794 aa7.54□□□□□ -1.2
CPS1-203ENST00000430249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 MAP3K7O43318 606 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 TMCC1O94876 653 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 PSMA2P25787 234 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 TOB2Q14106 344 aaPredicted RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 MAPK6Q16659 721 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 KNOP1Q1ED39 458 aaKnown RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 ALKBH5Q6P6C2 394 aaKnown RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 FASTKD5Q7L8L6 764 aaKnown RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 MRPL4Q9BYD3 311 aaKnown RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 ZNF302Q9NR11 478 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 ABHD10Q9NUJ1 306 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 ZHX2Q9Y6X8 837 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 ZNF335Q9H4Z2 1342 aaPredicted RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 SKIP12755 728 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 NR1D1P20393 614 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 SERPINB6P35237 376 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 RABL6Q3YEC7 729 aaPredicted RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 MTERF2Q49AM1 385 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 KIAA1755Q5JYT7 1200 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 CRLF3Q8IUI8 442 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 C2orf69Q8N8R5 385 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 DDX27Q96GQ7 796 aaKnown RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 PYCARDQ9ULZ3 195 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 STK38LQ9Y2H1 464 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 E9PCH4 1651 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 INO80Q9ULG1 1556 aaPredicted RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 TMEM247A6NEH6 219 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 RGL2O15211 777 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 OPHN1O60890 802 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 IRX5P78411 483 aaPredicted RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 MAPRE2Q15555 327 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 DSTYKQ6XUX3 929 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 BRINP3Q76B58 766 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 DNAAF3Q8N9W5 541 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 RDM1Q8NG50 284 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 PYROXD1Q8WU10 500 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 PSPC1Q8WXF1 523 aaKnown RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 MTBPQ96DY7 904 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 TEX12Q9BXU0 123 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 EHD2Q9NZN4 543 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 POC1B-GALNT4F8VUJ3 575 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 PDXKO00764 312 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 PLS3P13797 630 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 MUTP22033 750 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 COASYQ13057 564 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 TRADDQ15628 312 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 LRRC31Q6UY01 552 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 NEDD1Q8NHV4 660 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 LPAR1Q92633 364 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.53□□□□□ -1.2
CPS1-203ENST00000430249 DNAJC12Q9UKB3 198 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 MINPP1Q9UNW1 487 aa7.53□□□□□ -1.2
CPS1-203ENST00000430249 RPLP2P05387 115 aaKnown RBP7.52□□□□□ -1.2
CPS1-203ENST00000430249 CYP19A1P11511 503 aaPredicted RBP7.52□□□□□ -1.2
CPS1-203ENST00000430249 QARSP47897 775 aaKnown RBP7.52□□□□□ -1.2
CPS1-203ENST00000430249 CCT5P48643 541 aa7.52□□□□□ -1.2
CPS1-203ENST00000430249 ATP2C1P98194 919 aaPredicted RBP7.52□□□□□ -1.2
CPS1-203ENST00000430249 PSMD6Q15008 389 aa7.52□□□□□ -1.2
CPS1-203ENST00000430249 PADI6Q6TGC4 694 aa7.52□□□□□ -1.2
CPS1-203ENST00000430249 RNF169Q8NCN4 708 aa7.52□□□□□ -1.2
CPS1-203ENST00000430249 DDX17Q92841 729 aaKnown RBP7.52□□□□□ -1.2
CPS1-203ENST00000430249 SLC10A4Q96EP9 437 aa7.52□□□□□ -1.2
CPS1-203ENST00000430249 TMEM47Q9BQJ4 181 aa7.52□□□□□ -1.2
CPS1-203ENST00000430249 WDR35Q9P2L0 1181 aa7.52□□□□□ -1.2
CPS1-203ENST00000430249 P4HA2O15460 535 aa7.52□□□□□ -1.21
CPS1-203ENST00000430249 PRKAB2O43741 272 aa7.52□□□□□ -1.21
CPS1-203ENST00000430249 GDF11O95390 407 aa7.52□□□□□ -1.21
CPS1-203ENST00000430249 EYA4O95677 639 aa7.52□□□□□ -1.21
CPS1-203ENST00000430249 PLTPP55058 493 aa7.52□□□□□ -1.21
CPS1-203ENST00000430249 C17orf53Q8N3J3 647 aaPredicted RBP7.52□□□□□ -1.21
CPS1-203ENST00000430249 SH3RF3Q8TEJ3 882 aaPredicted RBP7.52□□□□□ -1.21
CPS1-203ENST00000430249 COA7Q96BR5 231 aa7.52□□□□□ -1.21
CPS1-203ENST00000430249 TACO1Q9BSH4 297 aaKnown RBP7.52□□□□□ -1.21
CPS1-203ENST00000430249 TSSK1BQ9BXA7 367 aa7.52□□□□□ -1.21
CPS1-203ENST00000430249 ACAD9Q9H845 621 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms