RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PTPRSQ13332 1948 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TRANK1O15050 2925 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 IGKV6D-21A0A0A0MT36 114 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 C9IYK1 514 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 DNM2P50570 870 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 FAM189BP81408 668 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ITIH3Q06033 890 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 GIT2Q14161 759 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 FAM102BQ5T8I3 360 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 WWC2Q6AWC2 1192 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TMEM184AQ6ZMB5 413 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 DHX32Q7L7V1 743 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TRMT1LQ7Z2T5 733 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 RAB11FIP4Q86YS3 637 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CYP2W1Q8TAV3 490 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ATOH1Q92858 354 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ZBTB10Q96DT7 871 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 INO80BQ9C086 356 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TAF6LQ9Y6J9 622 aa13.9□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 GOLGA8AA7E2F4 631 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 GOLGA8BA8MQT2 603 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 EOMESO95936 686 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 SKIP12755 728 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 NECTIN1Q15223 517 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PTPN21Q16825 1174 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 KIZQ2M2Z5 673 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 JAKMIP3Q5VZ66 844 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ANKRD54Q6NXT1 300 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 APOA5Q6Q788 366 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 KCNT2Q6UVM3 1135 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 UBALD2Q8IYN6 164 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 LRRC43Q8N309 656 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 RASGRP4Q8TDF6 673 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PGBD1Q96JS3 809 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 RIPOR3Q96MK2 946 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 OSMRQ99650 979 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ESYT1Q9BSJ8 1104 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 MRPL9Q9BYD2 267 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 LRRC2Q9BYS8 371 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 TMX1Q9H3N1 280 aa13.89□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CYP3A4P08684 503 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 EIF4BP23588 611 aaKnown RBP13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 AVPR2P30518 371 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 MTHFRP42898 656 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 GATMP50440 423 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 RCAN1P53805 252 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 NLRP11P59045 1033 aaKnown RBP13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ERVFC1P60507 584 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ITGB3BPQ13352 177 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ATAT1Q5SQI0 421 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 LLGL2Q6P1M3 1020 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 RNF169Q8NCN4 708 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 LSG1Q9H089 658 aaKnown RBP13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 STK39Q9UEW8 545 aa13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQB3-203ENST00000425319 RALGAPA2Q2PPJ7 1873 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 KAT6AQ92794 2004 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 WDR64B1ANS9 1081 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CXCL14O95715 111 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 VTNP04004 478 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 FGFR1P11362 822 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 SFNP31947 248 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ELMSAN1Q6PJG2 1045 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CCDC148Q8NFR7 591 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 SUSD6Q92537 303 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PPP1R16BQ96T49 567 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 MFSD1Q9H3U5 465 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CHST12Q9NRB3 414 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 GABBR1Q9UBS5 961 aa13.87□□□□□ -0.19
HLA-DQB3-203ENST00000425319 KLF18A0A0U1RQI7 1052 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 MGEA5O60502 916 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 GLP2RO95838 553 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 TBC1D8BQ0IIM8 1120 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 FAM228AQ86W67 206 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PPFIBP1Q86W92 1011 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ECHDC2Q86YB7 292 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CCDC60Q8IWA6 550 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 MRPL43Q8N983 215 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 NLRP7Q8WX94 980 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CWH43Q9H720 699 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 SORCS3Q9UPU3 1222 aa13.86□□□□□ -0.19
HLA-DQB3-203ENST00000425319 MUC3AQ02505 3323 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 FSCN2O14926 492 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 GFRA3O60609 400 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 GPR32O75388 356 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms