RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 LETM2Q2VYF4 491 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 HSDL1Q3SXM5 330 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 FAM26DQ5JW98 314 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 KIAA1211LQ6NV74 962 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 TSHZ1Q6ZSZ6 1077 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 RTN4RL1Q86UN2 441 aaPredicted RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 CABP7Q86V35 215 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 PLEKHM2Q8IWE5 1019 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 C12orf50Q8NA57 414 aaPredicted RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 DNERQ8NFT8 737 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 DCAF4Q8WV16 495 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 AUTS2Q8WXX7 1259 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 NELL1Q92832 810 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 TTC14Q96N46 770 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 C16orf70Q9BSU1 422 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 SCNM1Q9BWG6 230 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 EHMT1Q9H9B1 1298 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 AGO3Q9H9G7 860 aaKnown RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 TYW1Q9NV66 732 aaKnown RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 DDX41Q9UJV9 622 aaKnown RBP6.55□□□□□ -1.36
HDAC8-212ENST00000421523 GPSM3Q9Y4H4 160 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 LAMA4Q16363 1823 aa6.55□□□□□ -1.36
HDAC8-212ENST00000421523 MYH6P13533 1939 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 FRMPD2Q68DX3 1309 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 BAZ2BQ9UIF8 2168 aaKnown RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 FNDC1Q4ZHG4 1894 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 KANSL1LA0AUZ9 987 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 FAM170BA6NMN3 283 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 H3BRB1 525 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 RANBP6O60518 1105 aaKnown RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 PPFIA4O75335 1185 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 TOP1P11387 765 aaKnown RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 PCP11498 1178 aaKnown RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 SDSP20132 328 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 CD72P21854 359 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 ZNF543Q08ER8 600 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 SRSF5Q13243 272 aaKnown RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 NMIQ13287 307 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 AAMPQ13685 434 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 SIM2Q14190 667 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 FBXO47Q5MNV8 452 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 FAM102BQ5T8I3 360 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 STPG1Q5TH74 334 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 TRIM50Q86XT4 487 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 TBC1D10CQ8IV04 446 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 MRPL43Q8N983 215 aaKnown RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 GLIS3Q8NEA6 775 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 LMBR1Q8WVP7 490 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 SHDQ96IW2 340 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 TUT1Q9H6E5 874 aaKnown RBP6.54□□□□□ -1.36
HDAC8-212ENST00000421523 SFXN1Q9H9B4 322 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 WASF3Q9UPY6 502 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 LZTS1Q9Y250 596 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 PCDHB7Q9Y5E2 793 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 MYO9AB2RTY4 2548 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 TICRRQ7Z2Z1 1910 aa6.54□□□□□ -1.36
HDAC8-212ENST00000421523 CCDC171Q6TFL3 1326 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 NRCAMQ92823 1304 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 LOXHD1Q8IVV2 1947 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 GGPS1O95749 300 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 LGALS2P05162 132 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 GNAT1P11488 350 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 LAG3P18627 525 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 PDE4AP27815 886 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 LIMK1P53667 647 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 STARD6P59095 220 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 PLCB3Q01970 1234 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 NUCB1Q02818 461 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 KRT17Q04695 432 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 MGAT3Q09327 533 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 C19orf57Q0VDD7 668 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 PAK2Q13177 524 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 STXBP2Q15833 593 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 USH1GQ495M9 461 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 SYDE2Q5VT97 1194 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 MYSM1Q5VVJ2 828 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 GPR149Q86SP6 731 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 DGKHQ86XP1 1220 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 CELF5Q8N6W0 485 aaKnown RBP6.53□□□□□ -1.36
HDAC8-212ENST00000421523 RGS22Q8NE09 1264 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 BBXQ8WY36 941 aaPredicted RBP6.53□□□□□ -1.36
HDAC8-212ENST00000421523 LRIG1Q96JA1 1093 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 DCBLD2Q96PD2 775 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 LSM14BQ9BX40 385 aaKnown RBP6.53□□□□□ -1.36
HDAC8-212ENST00000421523 LNPKQ9C0E8 428 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 MAF1Q9H063 256 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 IL25Q9H293 177 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 PRMT8Q9NR22 394 aaPredicted RBP6.53□□□□□ -1.36
HDAC8-212ENST00000421523 FARP1Q9Y4F1 1045 aaPredicted RBP6.53□□□□□ -1.36
HDAC8-212ENST00000421523 CDY2AQ9Y6F7 541 aa6.53□□□□□ -1.36
HDAC8-212ENST00000421523 NEDD4P46934 1319 aa6.52□□□□□ -1.37
HDAC8-212ENST00000421523 WDR19Q8NEZ3 1342 aa6.52□□□□□ -1.37
HDAC8-212ENST00000421523 PTPN13Q12923 2485 aa6.52□□□□□ -1.37
HDAC8-212ENST00000421523 SDK1Q7Z5N4 2213 aa6.52□□□□□ -1.37
HDAC8-212ENST00000421523 FOXD2O60548 495 aaPredicted RBP6.52□□□□□ -1.37
HDAC8-212ENST00000421523 CXCL14O95715 111 aa6.52□□□□□ -1.37
HDAC8-212ENST00000421523 FGFR1P11362 822 aa6.52□□□□□ -1.37
HDAC8-212ENST00000421523 PLA2G2AP14555 144 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms