RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 HOMER3Q9NSC5 361 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 PPFIA4O75335 1185 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 GSTA1P08263 222 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 GSTA2P09210 222 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 CDC25AP30304 524 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 ARHGAP4P98171 946 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 ENAHQ8N8S7 591 aaPredicted RBP9.11□□□□□ -0.95
UBR4-206ENST00000419533 BANK1Q8NDB2 785 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 GCOM2Q9BZD3 368 aaPredicted RBP9.11□□□□□ -0.95
UBR4-206ENST00000419533 DEFB129Q9H1M3 183 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 SNAP23O00161 211 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 GFPT2O94808 682 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 BRD3Q15059 726 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 C1orf228Q6PIY5 440 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 UNC13DQ70J99 1090 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 SMYD4Q8IYR2 804 aaPredicted RBP9.11□□□□□ -0.95
UBR4-206ENST00000419533 NDUFAF2Q8N183 169 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 KCTD6Q8NC69 237 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 SLC44A5Q8NCS7 719 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 ENOX1Q8TC92 643 aaKnown RBP9.11□□□□□ -0.95
UBR4-206ENST00000419533 ZBTB9Q96C00 473 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 GOLGA8IPA6NC78 632 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 GOLGA8JA6NMD2 632 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 YWHAGP61981 247 aaKnown RBP eCLIP9.11□□□□□ -0.95
UBR4-206ENST00000419533 EHHADHQ08426 723 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 GOLGA8FQ08AF8 430 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 GOLGA8DPQ0D2H9 430 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 RESTQ13127 1097 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 SCARA5Q6ZMJ2 495 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 ADGRF4Q8IZF3 695 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 PROM2Q8N271 834 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 EEF2KMTQ96G04 330 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 RAB3IPQ96QF0 476 aaPredicted RBP9.11□□□□□ -0.95
UBR4-206ENST00000419533 MXD3Q9BW11 206 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 DPH5Q9H2P9 285 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 ZBBXA8MT70 800 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 HUS1O60921 280 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 ACTN1P12814 892 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 QARSP47897 775 aaKnown RBP9.1□□□□□ -0.95
UBR4-206ENST00000419533 GUCY2FP51841 1108 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 PTPROQ16827 1216 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 USP17L6PQ6QN14 398 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 CCHCR1Q8TD31 782 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 LPAR1Q92633 364 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 SLITRK6Q9H5Y7 841 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 LCMT1Q9UIC8 334 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 INPP5FQ9Y2H2 1132 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 COBLO75128 1261 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 SERPING1P05155 500 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 PSMC5P62195 406 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 PKP1Q13835 747 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 QRICH1Q2TAL8 776 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 ZNF568Q3ZCX4 644 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 ARHGEF18Q6ZSZ5 1173 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 RAB44Q7Z6P3 723 aaPredicted RBP9.1□□□□□ -0.95
UBR4-206ENST00000419533 LRRC8AQ8IWT6 810 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 REM2Q8IYK8 340 aaPredicted RBP9.1□□□□□ -0.95
UBR4-206ENST00000419533 GRAMD1CQ8IYS0 662 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 PIGOQ8TEQ8 1089 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 DAGLAQ9Y4D2 1042 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 SCINQ9Y6U3 715 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 HMGCS2P54868 508 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 KYAT1Q16773 422 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 BZW1Q7L1Q6 419 aaKnown RBP9.1□□□□□ -0.95
UBR4-206ENST00000419533 CYB5R4Q7L1T6 521 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 ADAT2Q7Z6V5 191 aaKnown RBP9.1□□□□□ -0.95
UBR4-206ENST00000419533 ANKRD42Q8N9B4 389 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 FAM133AQ8N9E0 248 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 ZNF512BQ96KM6 892 aaPredicted RBP9.1□□□□□ -0.95
UBR4-206ENST00000419533 WDR46O15213 610 aaKnown RBP9.1□□□□□ -0.95
UBR4-206ENST00000419533 HSPA6P17066 643 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 GPC3P51654 580 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 COG2Q14746 738 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 VCXQ9H320 206 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 BARHL2Q9NY43 387 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 RBL2Q08999 1139 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 SWSAP1Q6NVH7 229 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 ERICH1Q86X53 443 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 CACNA2D3Q8IZS8 1091 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 GPT2Q8TD30 523 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 RAD54LQ92698 747 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 DYDC2Q96IM9 177 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 OSBPL5Q9H0X9 879 aaPredicted RBP9.1□□□□□ -0.95
UBR4-206ENST00000419533 GABBR1Q9UBS5 961 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 JRKLQ9Y4A0 524 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 ANGPTL3Q9Y5C1 460 aa9.1□□□□□ -0.95
UBR4-206ENST00000419533 MANSC4A6NHS7 340 aaPredicted RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 DPYSL4O14531 572 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 SAT1P21673 171 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 EPHB1P54762 984 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 ZBED6P86452 979 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 MB21D2Q8IYB1 491 aaPredicted RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 TTC39CQ8N584 583 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 MAGOHBQ96A72 148 aaKnown RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 AIFM3Q96NN9 605 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 MTIF3Q9H2K0 278 aaKnown RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 PLEKHA4Q9H4M7 779 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 LY9Q9HBG7 655 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 POLIQ9UNA4 740 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms