RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 LOC102724159A0A0B4J2E5 919 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 CHMP2AO43633 222 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 NR3C2P08235 984 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 IQCF3P0C7M6 154 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 POU3F3P20264 500 aaPredicted RBP14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 CASP1P29466 404 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 RFC2P35250 354 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 TPM4P67936 248 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 TAP1Q03518 808 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 PDE4DQ08499 809 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 DPYDQ12882 1025 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 PWP2Q15269 919 aaKnown RBP14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 DPCR1Q3MIW9 517 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 BRDTQ58F21 947 aaPredicted RBP14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 NLRX1Q86UT6 975 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 LUZP1Q86V48 1076 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 TRIML1Q8N9V2 468 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 RETREG2Q8NC44 543 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 PNMA5Q96PV4 448 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 LRRC27Q9C0I9 530 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 JADE2Q9NQC1 790 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 RMND1Q9NWS8 449 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 UBIAD1Q9Y5Z9 338 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 SCN10AQ9Y5Y9 1956 aa14.67□□□□□ -0.06
HLA-DMB-258ENST00000418107 SMTNL1A8MU46 457 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 B4DLN1 442 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 DDX39AO00148 427 aaKnown RBP14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 IPO5O00410 1097 aaKnown RBP14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 SSBP05455 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 MYL1P05976 194 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 CHMP4BP1P59074 171 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 MTMR1Q13613 665 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 CUL4BQ13620 913 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 FRMPD4Q14CM0 1322 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 NAALADL2Q58DX5 795 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 NT5DC1Q5TFE4 455 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 NFRKBQ6P4R8 1299 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 HERC6Q8IVU3 1022 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 PHOSPHO2Q8TCD6 241 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 SCFD2Q8WU76 684 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 LARP4BQ92615 738 aaKnown RBP14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 RAD54LQ92698 747 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 FAM122AQ96E09 287 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 GSDMAQ96QA5 445 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 C1QTNF1Q9BXJ1 281 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 KCNH7Q9NS40 1196 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 KIAA1024Q9UPX6 916 aa14.66□□□□□ -0.06
HLA-DMB-258ENST00000418107 A6NJR5 290 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 NKRFO15226 690 aaKnown RBP eCLIP14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 PSMD10O75832 226 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 RPN1P04843 607 aaKnown RBP14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 ITGB5P18084 799 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 EDNRBP24530 442 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 SARSP49591 514 aaKnown RBP14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 ASIC1P78348 528 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 MRPS9P82933 396 aaKnown RBP14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 BFSP2Q13515 415 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 MORC3Q14149 939 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 MCM6Q14566 821 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 TMEM119Q4V9L6 283 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 SPRED2Q7Z698 418 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 AOPEPQ8N6M6 819 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 MLKLQ8NB16 471 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 MPHOSPH6Q99547 160 aaKnown RBP14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 RIT2Q99578 217 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 EIF2AK1Q9BQI3 630 aaKnown RBP14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 KBTBD4Q9NVX7 518 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 VAV3Q9UKW4 847 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 NOD1Q9Y239 953 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 TANC1Q9C0D5 1861 aa14.65□□□□□ -0.06
HLA-DMB-258ENST00000418107 POTEB3A0JP26 581 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 KPNA6O60684 536 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 ARIH2O95376 493 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 TXNP10599 105 aaKnown RBP14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 PPP2R5CQ13362 524 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 POTEBQ6S5H4 581 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 MIER3Q7Z3K6 550 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 VSIG10LQ86VR7 867 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 DNERQ8NFT8 737 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 IWS1Q96ST2 819 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 POLR3CQ9BUI4 534 aaPredicted RBP14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 EPHX3Q9H6B9 360 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 AGO4Q9HCK5 861 aaKnown RBP14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 TBC1D22BQ9NU19 505 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 EXOC1Q9NV70 894 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 COG5Q9UP83 839 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 DNM3Q9UQ16 869 aa14.64□□□□□ -0.07
HLA-DMB-258ENST00000418107 MED24O75448 989 aa14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 STAM2O75886 525 aa14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 KRT18P05783 430 aaKnown RBP14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 RPA1P27694 616 aa14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 CYP4A11Q02928 519 aa14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 SPIRE1Q08AE8 756 aa14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 STXBP2Q15833 593 aa14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 ECM1Q16610 540 aa14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 GNPTABQ3T906 1256 aa14.63□□□□□ -0.07
HLA-DMB-258ENST00000418107 HYIQ5T013 277 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms