RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 TGFB3P10600 412 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 ATP4AP20648 1035 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 SFPQP23246 707 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00330-201ENST00000414562 ACTR2P61160 394 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 ARID5BQ14865 1188 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 NR1I3Q14994 352 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 LRRC41Q15345 812 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 ABHD15Q6UXT9 468 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 FAM114A1Q8IWE2 563 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 MYOCDQ8IZQ8 938 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 SCFD2Q8WU76 684 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 TSG101Q99816 390 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 LXNQ9BS40 222 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 LIMA1Q9UHB6 759 aaKnown RBP12.48□□□□□ -0.41
LINC00330-201ENST00000414562 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 PTPN22Q9Y2R2 807 aa12.48□□□□□ -0.41
LINC00330-201ENST00000414562 MYH9P35579 1960 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 ZNF862O60290 1169 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 KIF20AO95235 890 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 ATG7O95352 703 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 TPM2P07951 284 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 COPB1P53618 953 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 EHHADHQ08426 723 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 GIT2Q14161 759 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 TTLL4Q14679 1199 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 DUSP28Q4G0W2 176 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 SPECC1LQ69YQ0 1117 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 TRIM50Q86XT4 487 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 CCDC60Q8IWA6 550 aaPredicted RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 PPP1R13LQ8WUF5 828 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 GPR20Q99678 358 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 DUSP9Q99956 384 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 REEP2Q9BRK0 252 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 VPS16Q9H269 839 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 JPH1Q9HDC5 661 aaPredicted RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 TAB2Q9NYJ8 693 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 SLC9A2Q9UBY0 812 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 P4HBP07237 508 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 EEF1GP26641 437 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 KRT76Q01546 638 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 TNFAIP2Q03169 654 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 CENPPQ6IPU0 288 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 METTL7BQ6UX53 244 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 APTXQ7Z2E3 356 aaKnown RBP12.47□□□□□ -0.41
LINC00330-201ENST00000414562 RAET1EQ8TD07 263 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 AFG1LQ8WV93 481 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 CDHR1Q96JP9 859 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 RUSC1Q9BVN2 902 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 SEMA6BQ9H3T3 888 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 ZSWIM4Q9H7M6 989 aa12.47□□□□□ -0.41
LINC00330-201ENST00000414562 MYH11P35749 1972 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 IGKV6D-21A0A0A0MT36 114 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 ARHGEF35A5YM69 484 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 B4DLN1 442 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 TEX33O43247 280 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 GNRH1P01148 92 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 INHAP05111 366 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 SKILP12757 684 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 HOXD10P28358 340 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 JAK3P52333 1124 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 RINT1Q6NUQ1 792 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 SMAP1Q8IYB5 467 aaPredicted RBP12.46□□□□□ -0.41
LINC00330-201ENST00000414562 PXYLP1Q8TE99 480 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 CCDC43Q96MW1 224 aaKnown RBP12.46□□□□□ -0.41
LINC00330-201ENST00000414562 SH2D3AQ9BRG2 576 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 COL4A3BPQ9Y5P4 624 aa12.46□□□□□ -0.41
LINC00330-201ENST00000414562 FRMD3A2A2Y4 597 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 LRRC10BA6NIK2 292 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 WDR64B1ANS9 1081 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 DYNC1LI2O43237 492 aaPredicted RBP12.45□□□□□ -0.42
LINC00330-201ENST00000414562 FAM13AO94988 1023 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 SFNP31947 248 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 MTIF2P46199 727 aaKnown RBP12.45□□□□□ -0.42
LINC00330-201ENST00000414562 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
LINC00330-201ENST00000414562 BEX3Q00994 111 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 LRRC63Q05C16 580 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 MTFR1Q15390 333 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 MFSD14CQ5VZR4 134 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 ZNF746Q6NUN9 644 aaPredicted RBP12.45□□□□□ -0.42
LINC00330-201ENST00000414562 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 IRF2BP1Q8IU81 584 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 C17orf53Q8N3J3 647 aaPredicted RBP12.45□□□□□ -0.42
LINC00330-201ENST00000414562 GLIS3Q8NEA6 775 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 KIAA1524Q8TCG1 905 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 EEF2KMTQ96G04 330 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 MPHOSPH6Q99547 160 aaKnown RBP12.45□□□□□ -0.42
LINC00330-201ENST00000414562 PRDM16Q9HAZ2 1276 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 MYCP01106 439 aaPredicted RBP12.45□□□□□ -0.42
LINC00330-201ENST00000414562 HMGCRP04035 888 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 SUPT20HL2P0C7V6 817 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 GAP43P17677 238 aa12.45□□□□□ -0.42
LINC00330-201ENST00000414562 GRK4P32298 578 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms