RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ANKRD20A2Q5SQ80 823 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 ANKRD20A1Q5TYW2 823 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 HPCAL4Q9UM19 191 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 NEDD4P46934 1319 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 METP08581 1390 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 E9PMD0 336 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 DR1Q01658 176 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 LBHD1Q9BQE6 289 aaPredicted RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 JPH2Q9BR39 696 aaPredicted RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 CAPN11Q9UMQ6 739 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 PACSIN2Q9UNF0 486 aaPredicted RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 ABCC12Q96J65 1359 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 SPAG7O75391 227 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 PBXIP1Q96AQ6 731 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 MRPL47Q9HD33 250 aaKnown RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 ADAMTS1Q9UHI8 967 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 E5RI56 91 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 ATP6V1E1P36543 226 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 GPSM2P81274 684 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 CCDC85BQ15834 202 aaPredicted RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 THEMIS2Q5TEJ8 643 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 SPATA33Q96N06 139 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 SLC13A1Q9BZW2 595 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 FAM217BQ9NTX9 383 aaPredicted RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 PGRMC1O00264 195 aaKnown RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 ZSCAN9O15535 394 aaPredicted RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 LMNB2Q03252 620 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 GFPT1Q06210 699 aaPredicted RBP14.74□□□□□ -0.05
VAPA-202ENST00000400000 TMED1Q13445 227 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 ARID5BQ14865 1188 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 SLC39A14Q15043 492 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 CEP19Q96LK0 163 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 KRT10P13645 584 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 GPC3P51654 580 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 KLC3Q6P597 504 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 C11orf74Q86VG3 221 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 BHMTQ93088 406 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 NFU1Q9UMS0 254 aa14.74□□□□□ -0.05
VAPA-202ENST00000400000 DNAJC6O75061 913 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 MAP2K2P36507 400 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 KIF23Q02241 960 aaPredicted RBP14.73□□□□□ -0.05
VAPA-202ENST00000400000 ZNF667Q5HYK9 610 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 MDH1BQ5I0G3 518 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 URGCPQ8TCY9 931 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 SMAD5Q99717 465 aaKnown RBP14.73□□□□□ -0.05
VAPA-202ENST00000400000 HLA-DPA1P20036 260 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 MCAMP43121 646 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 DAB2P98082 770 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 EGFL8Q99944 293 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 RNF26Q9BY78 433 aaPredicted RBP14.73□□□□□ -0.05
VAPA-202ENST00000400000 MYOM2P54296 1465 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 CAPN15O75808 1086 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 RASSF3Q86WH2 238 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 TRIM4Q9C037 500 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 STK17AQ9UEE5 414 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 FAM95CA0A1B0GW59 222 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 FGGP02679 453 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 CIITAP33076 1130 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 SFR1Q86XK3 245 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 TMCO5AQ8N6Q1 288 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 DHTKD1Q96HY7 919 aaPredicted RBP14.73□□□□□ -0.05
VAPA-202ENST00000400000 CASS4Q9NQ75 786 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 GABBR1Q9UBS5 961 aa14.73□□□□□ -0.05
VAPA-202ENST00000400000 SMAP1Q8IYB5 467 aaPredicted RBP14.72□□□□□ -0.05
VAPA-202ENST00000400000 CCNYL1Q8N7R7 359 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 BLMP54132 1417 aaPredicted RBP14.72□□□□□ -0.05
VAPA-202ENST00000400000 PPP6R2O75170 966 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 E2F6O75461 281 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 PALMO75781 387 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 SERPING1P05155 500 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 FKBP3Q00688 224 aaKnown RBP14.72□□□□□ -0.05
VAPA-202ENST00000400000 STXBP2Q15833 593 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 FAM47EQ6ZV65 393 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 POTEFA5A3E0 1075 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 POTEIP0CG38 1075 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 ATP1A3P13637 1013 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 POTEGQ6S5H5 508 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 YAF2Q8IY57 180 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 TRIML1Q8N9V2 468 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 MAP4K1Q92918 833 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 ASIC4Q96FT7 647 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 TRAIPQ9BWF2 469 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 DNAJC12Q9UKB3 198 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 POTEB3A0JP26 581 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 POTECB2RU33 542 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 H0Y3Z8 333 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 NCK2O43639 380 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 HUS1O60921 280 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 ASMTLO95671 621 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 NNTQ13423 1086 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 GRAMD1BQ3KR37 738 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 POTEBQ6S5H4 581 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 OXER1Q8TDS5 423 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 LZICQ8WZA0 190 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 ALG13Q9NP73 1137 aaKnown RBP14.72□□□□□ -0.05
VAPA-202ENST00000400000 ZFYVE16Q7Z3T8 1539 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 PP2D1A8MPX8 630 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 TSPY1Q01534 308 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 KIAA1755Q5JYT7 1200 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms