RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ANKRD20A2Q5SQ80 823 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 ANKRD20A1Q5TYW2 823 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 ANKRD20A3Q5VUR7 823 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 NUGGCQ68CJ6 796 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 CERKQ8TCT0 537 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 P3H4Q92791 437 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 DBNDD1Q9H9R9 158 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTPRA-205ENST00000399903 MYMKA6NI61 221 aa18.52■□□□□ 0.55
PTPRA-205ENST00000399903 MARCH6O60337 910 aa18.52■□□□□ 0.55
PTPRA-205ENST00000399903 MXRA7P84157 204 aa18.52■□□□□ 0.55
PTPRA-205ENST00000399903 ZMYND12Q9H0C1 365 aa18.52■□□□□ 0.55
PTPRA-205ENST00000399903 NSRP1Q9H0G5 558 aaKnown RBP18.52■□□□□ 0.55
PTPRA-205ENST00000399903 MAD2L2Q9UI95 211 aa18.52■□□□□ 0.55
PTPRA-205ENST00000399903 NR2E1Q9Y466 385 aa18.52■□□□□ 0.55
PTPRA-205ENST00000399903 FOXO6A8MYZ6 492 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 G3V3G9 751 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 ABCB4P21439 1286 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 CTCFP49711 727 aaPredicted RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 DCAF8Q5TAQ9 597 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 TCERG1LQ5VWI1 586 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 EPS8L3Q8TE67 593 aaKnown RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 CEP95Q96GE4 821 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.51■□□□□ 0.553e-8■■■□□ 14.8
PTPRA-205ENST00000399903 MYH7BA7E2Y1 1941 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 FLT1P17948 1338 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 NID2Q14112 1375 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 OR52Z1P0C646 297 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 ATP2A2P16615 1042 aaKnown RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 FGFR4P22455 802 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 RNASELQ05823 741 aaKnown RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 SLC29A2Q14542 456 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 SHROOM1Q2M3G4 852 aaPredicted RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 UBAP2Q5T6F2 1119 aaKnown RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 ETAA1Q9NY74 926 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 SRRM3A6NNA2 597 aaPredicted RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 TCP11X1B4DZS4 312 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 SMNDC1O75940 238 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 SNUPNO95149 360 aaKnown RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 CRY2Q49AN0 593 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
PTPRA-205ENST00000399903 MTA3Q9BTC8 594 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 CCSER1Q9C0I3 900 aa18.51■□□□□ 0.55
PTPRA-205ENST00000399903 KLRF2D3W0D1 207 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 PPEF1O14829 653 aaPredicted RBP18.5■□□□□ 0.55
PTPRA-205ENST00000399903 APBA3O96018 575 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 ATP2B4P23634 1241 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 SESN3P58005 492 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 NCALDP61601 193 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 GSTO1P78417 241 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 PTK2Q05397 1052 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 TCP10Q12799 353 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 CENPPQ6IPU0 288 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 CERS5Q8N5B7 392 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 TSC22D3Q99576 134 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 PAIP2Q9BPZ3 127 aaKnown RBP18.5■□□□□ 0.55
PTPRA-205ENST00000399903 PCDHA6Q9UN73 950 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 PCDHGC5Q9Y5F6 944 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 PCDHA8Q9Y5H6 950 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 A0A1B0GUL6 1792 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 LDHCP07864 332 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 ADCY2Q08462 1091 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 C11orf91Q3C1V1 193 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 CEP72Q9P209 647 aa18.5■□□□□ 0.55
PTPRA-205ENST00000399903 NAPAP54920 295 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 C1orf131Q8NDD1 294 aaKnown RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 SLC12A4Q9UP95 1085 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 DAGLAQ9Y4D2 1042 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 CFAP73A6NFT4 308 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 USP17L5A8MUK1 530 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 MMP10P09238 476 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 GNAT1P11488 350 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 USP11P51784 963 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 RCAN1P53805 252 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 RHBDL3P58872 404 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 PSMD2Q13200 908 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 ALKBH5Q6P6C2 394 aaKnown RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 NEK9Q8TD19 979 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 CCHCR1Q8TD31 782 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 L3MBTL3Q96JM7 780 aaPredicted RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 ZNF317Q96PQ6 595 aaPredicted RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 PPP1R12CQ9BZL4 782 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 DDX4Q9NQI0 724 aaKnown RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 POTEMA6NI47 508 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 PMS2P54278 862 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 CDCA2Q69YH5 1023 aaPredicted RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 SLC30A9Q6PML9 568 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 U2AF1L4Q8WU68 220 aaKnown RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 SCFD2Q8WU76 684 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 GJA10Q969M2 543 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 ZC3H12CQ9C0D7 883 aaKnown RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 GPCPD1Q9NPB8 672 aa18.49■□□□□ 0.55
PTPRA-205ENST00000399903 DNAJC17Q9NVM6 304 aaKnown RBP18.49■□□□□ 0.55
PTPRA-205ENST00000399903 HIP1RO75146 1068 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 TMED8Q6PL24 325 aaPredicted RBP18.48■□□□□ 0.55
PTPRA-205ENST00000399903 CRELD2Q6UXH1 353 aaPredicted RBP18.48■□□□□ 0.55
PTPRA-205ENST00000399903 IQCDQ96DY2 449 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 PBKQ96KB5 322 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 BIN2Q9UBW5 565 aaPredicted RBP18.48■□□□□ 0.55
PTPRA-205ENST00000399903 COL4A3BPQ9Y5P4 624 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms